Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04285 ATGGATGGCACCAACAACAACACTTCATCGGTGCCACCACCAATACAACTCCCTGATATAGTCACATCTTCATCAGCACCAACAACTCCTTCATCTTCTCCGGCAACTACCGGAGTGGTGGGACGATACCGTGGAACTCGTTGTAGGAGTGGGAAATGGGTATCAGAGATACGTGAGCCACGTAAAACAAAGCGCATTTGGTTAGGAACATACCCTACAGCTGAAATGGCAGCTGCTGCTTATGATGTTGCTGCTCTTGCTTTAAAAGGACCTGATACTACTCTTAACTTTCCCAATTCAATACTATCTTACCCTATTCCTGCTTCATTGTCTTCAACTGATATTCGTGCTGCTGCTGAAGCTGCTGCACAAGCCAGAATCATGAGACCAGCACAACAAGAACAGCAACAAAACCCTTCAGCTTTTAGTTTTGAAGGGTCTTCTTCAAGTAGTGGAATGCAACAACAACAACAACAACAACATGAATATATTGATGAAGACGAGTTGTTGAATATGCCAAGTTTGTTAGATGATATGGCTAGAGGAATGCAGGTTAGTCCACCAAGGATGAGTTCATTCTCTAATTGTTCTTCAGATGATTCACCTCGCAATTCTGATGGAGGAGATAATCTTTGGAGTTACAATTTTTGA 651 0.427 MDGTNNNTSSVPPPIQLPDIVTSSSAPTTPSSSPATTGVVGRYRGTRCRSGKWVSEIREPRKTKRIWLGTYPTAEMAAAAYDVAALALKGPDTTLNFPNSILSYPIPASLSSTDIRAAAEAAAQARIMRPAQQEQQQNPSAFSFEGSSSSSGMQQQQQQQHEYIDEDELLNMPSLLDDMARGMQVSPPRMSSFSNCSSDDSPRNSDGGDNLWSYNF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04285 216 CDD AP2 42 100 IPR001471 GO:0003700|GO:0006355
Mepo4g04285 216 Pfam AP2 domain 47 90 IPR001471 GO:0003700|GO:0006355
Mepo4g04285 216 MobiDBLite consensus disorder prediction 126 162 - -
Mepo4g04285 216 MobiDBLite consensus disorder prediction 187 216 - -
Mepo4g04285 216 FunFam Ethylene-responsive transcription factor 2 42 99 - -
Mepo4g04285 216 MobiDBLite consensus disorder prediction 1 39 - -
Mepo4g04285 216 MobiDBLite consensus disorder prediction 1 41 - -
Mepo4g04285 216 MobiDBLite consensus disorder prediction 129 160 - -
Mepo4g04285 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 27 190 - -
Mepo4g04285 216 Gene3D AP2/ERF domain 41 100 IPR036955 GO:0003700|GO:0006355
Mepo4g04285 216 SUPERFAMILY DNA-binding domain 43 100 IPR016177 GO:0003677
Mepo4g04285 216 MobiDBLite consensus disorder prediction 177 216 - -
Mepo4g04285 216 ProSiteProfiles AP2/ERF domain profile. 35 98 IPR001471 GO:0003700|GO:0006355
Mepo4g04285 216 SMART rav1_2 42 104 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04285 Mepo-Chr4 52626288 52627712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04285 37 214 AP2-EREBP Transcription Factor Family AT5G52020 51.053 2.92e-47 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g04285 AP2 2.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04285 - - psat:127091780 264.233