Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04276 ATGGGTTTTCTCCGGCGACTCTTTGGCGCCAAAAAACCGATCCCTCCCTCCGACGGGTCGGGTAAAAAATCTGATAAAGATAACAACAAGAGAAGATGGAGCTTCGGAAAACAAAGCAGTAAAAGAAAGTCACTTCCACCACCGCCACCCTCCGCCTTCAACCAATTTGATTCCTCCACTTCCTTAGAACGCAACAAACATGCAATCGCCGTTGCTGCGGCAACAGCAGCAGTCGCGGAGGCAGCTCTAGCTGCTGCACATGCCGCGGCTGAGGTGGTCAGACTTACAAGCAGCGGCGTGGCGGGAAGTAGTAACAAAGCGCGTGGTGGTCAGTTACGGTTGCCGGAGGAGACTGCCGCCGTTAAAATACAGTCAGCTTTTCGTGGTTATTTGGCAAGGAGAGCGTTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCACTGGTTCGAGGCCACATTGTGAGAAAGAAAACTGCAGATATGCTCAGGCGTATGCAAACATTGGTGCGACTACAGACAAAGGCACGTGCAAGTCGTGTGCACTTGTCATCAGATAATCTGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGAATATGAGCAACCACATCATGTCTATAGTACAAAATTCGGTGGATCTTCCATCCTCAAGAGATGCAGTTCCAATACAAATTTTAGGAAGATTGAGTCAGAGAAACCACGGTTTGGCTCCAATTGGTTAGACCATTGGATGCAAGAGAACTCCATTAGCCAAACCAAAAACGCATCATCGAAGAATAAACACCCTGATGAACATAAAAGTGATAAGATTCTCGAAGTAGATACTTGGAAGCCACGGTTGAATAAAAATGAGAATATTGTGAATTCTATGTCAAATGAGTCTCCATCAAAACATTCAACAAAAGCTCAAAATCGAAGTCTCTCATTGAAGTTTCACAAAGCAAAAGAAGAAGTAGCAGCATCGCGCACTGCTGATAATAGTCCACAAACATTTTCTGCTTCTTCAAGAAATGGAAGTGGTGTAAGAAGAAATACCCCCTTTACACCTACAAGAAGTGAGTGTTCATGGAGTTTCTTAGGTGGTTACTCTGGTTACCCTAATTACATGGCAAACACCGAATCTTCTAAAGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGACATGAGTTTGAGGAATACAGTTCTACTAGAAGGCCTTTTCAGGGTCTTTGGGATGTGGGGTCTACTAATTCAGACAATGATTCTGATTCAAGGAGCAACAAAGTCTCACCTGCTTTGAGTCGTTTTAATAGAATTGGAAGTAGCAATTTAAGGTGA 1332 0.4407 MGFLRRLFGAKKPIPPSDGSGKKSDKDNNKRRWSFGKQSSKRKSLPPPPPSAFNQFDSSTSLERNKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSSGVAGSSNKARGGQLRLPEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKKTADMLRRMQTLVRLQTKARASRVHLSSDNLHSFKSSLSHYPVPEEYEQPHHVYSTKFGGSSILKRCSSNTNFRKIESEKPRFGSNWLDHWMQENSISQTKNASSKNKHPDEHKSDKILEVDTWKPRLNKNENIVNSMSNESPSKHSTKAQNRSLSLKFHKAKEEVAASRTADNSPQTFSASSRNGSGVRRNTPFTPTRSECSWSFLGGYSGYPNYMANTESSKAKVRSQSAPRQRHEFEEYSSTRRPFQGLWDVGSTNSDNDSDSRSNKVSPALSRFNRIGSSNLR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04276 443 PANTHER IQ-DOMAIN 5-RELATED 20 415 - -
Mepo4g04276 443 Gene3D - 115 180 - -
Mepo4g04276 443 Pfam IQ calmodulin-binding motif 119 137 IPR000048 GO:0005515
Mepo4g04276 443 Pfam IQ calmodulin-binding motif 140 157 IPR000048 GO:0005515
Mepo4g04276 443 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 161 IPR027417 -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 406 443 - -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 285 311 - -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 326 351 - -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 18 34 - -
Mepo4g04276 443 ProSiteProfiles IQ motif profile. 116 144 IPR000048 GO:0005515
Mepo4g04276 443 MobiDBLite consensus disorder prediction 380 443 - -
Mepo4g04276 443 SMART iq_5 138 159 IPR000048 GO:0005515
Mepo4g04276 443 SMART iq_5 115 137 IPR000048 GO:0005515
Mepo4g04276 443 ProSiteProfiles IQ motif profile. 140 167 IPR000048 GO:0005515
Mepo4g04276 443 MobiDBLite consensus disorder prediction 261 283 - -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 254 351 - -
Mepo4g04276 443 MobiDBLite consensus disorder prediction 1 57 - -
Mepo4g04276 443 Pfam Protein of unknown function (DUF4005) 332 418 IPR025064 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04276 Mepo-Chr4 52518685 52524238 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04276 1 409 IQD Protein Family AT5G62070 46.977 5.91e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04276 - - gmx:100783694 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04276 4 52518685 52524238 Mepo4g04276 4 52518685 52524238 ECH
Mepo7g01215 7 19574458 19581549 Mepo4g04276 4 52518685 52524238 PCT