Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04272 ATGGAGGGGCAGAGTGAGATTGGTCTCACTGGTGATAGTTTAGATACTGGTCTGCTTGGGAGAATGAGAGAGGATGAGTATGAAAGCCGGTCCGGAAGCGATAACTTTGATCTTGAAGGATTATCCGGTGATGATCAGGATGGTGGTGATGATGGTCAGCGTAAGAGGAAGAAGAGATACCACAGACACACTCCTAATCAAATTCAAGAGCTTGAATCTTTCTTCAAAGAGTGTCCTCATCCTGATGAAAAACAAAGATTGGATCTTAGCAAGAGACTTGGCTTGGAAAATAAACAAGTCAAATTCTGGTTTCAGAATCGTCGAACCCAAATGAAGACTCAACTGGAAAGGCATGAGAACATAATGCTTAGGCAGGAAAATGACAAGCTTAGAGGCGAGAATAGCATGATGAAAGAAGCAATGGTGAATCCAATATGCAACAACTGTGGTGGACCAGCAATTCCTGGCCAAATATTGTTCGAAGAGCACCAGATTAGAATTGAAAACGCTCGTCTAAAGGACGAATTGAACCGTATATGTGCCTTAACAAACAAGTTCCTTGGCAAACCAATATCATCATTGGCTAATCCCATGGCTCTACCAACCTCAAATTCTGGTCTAGAACTTGGTATCGGAAGGAACGGTTTTGGTGGTGGTTCAAGCTCCCTCGGCAATCCTTTGCCAATGGGACTTGATCTTGGAGATGGTCGCTCAATGCCTGGTATTAGTTCACCAATGGGATTGATGGGAAGTAGTAGTGATGTTCAGCTTGAGAGATCGGCTCTAATAGATCTTGCATTGGCTGCTATGGATGAATTATTAAAGATGGCTCAGACTGATAGTCCTGTTTGGATTAAGGGTTTGGATGGAGAGAGAGACATATTGAATCAAGAAGAGTATGCACGGTTGATTTCTTCTTGTATTGGTCCTAAACCCGCTGGTTTTGTCGCTGAAGCTACGAGAGAAACTGGGATAGTAATAATCAACAGTTTAGCACTTGTGGAAACTTTGATGGATGCGAATCGATACGCAGATATGTTTCAGTCTATGATTGCTAGATCTGCCAACCTTGATGTTTTATCTGGTGGAATCGGTGGAACCAGAAATGGGGCTATACATTTGATGCATACCGAGGTTCAATTGCTTTCACCACTAGTCCCGGTTCGTCAAGTGAGAATCCTTCGGTTCTGTAAGCAGCATGCAGAAGGTGTATGGGCCGTGGTTGATGTTTCCGTTGAGATTGGTCATGATCCTTCTAATGCACAACCATTCATAAGCTGTAGAAGACTTCCTTCTGGCTGTATTGTGCAGGATATGCCAAATGGTTACTCCAAGGTCACTTGGATTGAGCACTGGGAGTATGATGAGAGTATTGTTCACCAACTCTATCGTCCGTTGCTTATTTCCGGTTTTGGATTTGGCGCTCATAGATGGATCGCCACCCTCCAAAGGCAGTGTGAAGGCTTGGCTATCCTCATGTCCTCTTCCATCTCAAATGATGATCACACCGCATTGAGCCAAGCTGGTAGAAGAAGCATGTTGAAGCTGGCGCAACGTATGACCAACAACTTCTGTTCCGGGGTTTGTGCTTCATCTGCTAGAAAATGGGACAGCCTCCAAATGGGGACTCTGAGTGATGACATGAGAGTTATGACTAGGAAAAATGTTGATGACCCTGGCGAGCCTCCCGGTATCGTGCTCAGCGCTGCAACATCTGTTTGGATGCCAGTTTCACGACAAAGACTGTTTGATTTTCTACGTGATGAAAGGCTTCGAAGCGAGTGGGACATTTTGTCTAATGGTGGACCCATGCAAGAGATGGTTCACATTGCCAAAGGTCAAGGGCAAGGAAACTGCGTTTCTCTCCTTCGTGCTAATGCTGTTAATGCGAATGATAGCAGCATGTTGATTCTGCAAGAAACTTGGATGGATACATCATGCTCGGTGGTGGTGTATGCACCGGTTGACGGACAATCATTGAATGTGGTGATGAGTGGTGGAGATTCTGCATATGTTGCACTCTTGCCTTCAGGCTTTGCCATTGTTCCTGATGGTAATGATCCCTCTGGCTATGGCATGTCAAATGGTACTTTACAGAAAGGTGGTGCTGGCGACGGTGGTGGAAGTTTGCTCACAGTTGGATTCCAAATTCTGGTGAATAGTCTTCCCTCTGCTAAGCTCACAATGGAGTCAGTTGATACTGTGAATAATCTCATCTCATGCACCATTCAGAAGATCAAAGCTGCACTTAGAGTTGCATAA 2262 0.4474 MEGQSEIGLTGDSLDTGLLGRMREDEYESRSGSDNFDLEGLSGDDQDGGDDGQRKRKKRYHRHTPNQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENDKLRGENSMMKEAMVNPICNNCGGPAIPGQILFEEHQIRIENARLKDELNRICALTNKFLGKPISSLANPMALPTSNSGLELGIGRNGFGGGSSSLGNPLPMGLDLGDGRSMPGISSPMGLMGSSSDVQLERSALIDLALAAMDELLKMAQTDSPVWIKGLDGERDILNQEEYARLISSCIGPKPAGFVAEATRETGIVIINSLALVETLMDANRYADMFQSMIARSANLDVLSGGIGGTRNGAIHLMHTEVQLLSPLVPVRQVRILRFCKQHAEGVWAVVDVSVEIGHDPSNAQPFISCRRLPSGCIVQDMPNGYSKVTWIEHWEYDESIVHQLYRPLLISGFGFGAHRWIATLQRQCEGLAILMSSSISNDDHTALSQAGRRSMLKLAQRMTNNFCSGVCASSARKWDSLQMGTLSDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSRQRLFDFLRDERLRSEWDILSNGGPMQEMVHIAKGQGQGNCVSLLRANAVNANDSSMLILQETWMDTSCSVVVYAPVDGQSLNVVMSGGDSAYVALLPSGFAIVPDGNDPSGYGMSNGTLQKGGAGDGGGSLLTVGFQILVNSLPSAKLTMESVDTVNNLISCTIQKIKAALRVA 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04272 753 ProSiteProfiles 'Homeobox' domain profile. 54 114 IPR001356 GO:0003677
Mepo4g04272 753 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 54 750 IPR042160 -
Mepo4g04272 753 Pfam START domain 265 487 IPR002913 GO:0008289
Mepo4g04272 753 ProSitePatterns 'Homeobox' domain signature. 89 112 IPR017970 GO:0000981|GO:0006355
Mepo4g04272 753 SUPERFAMILY Homeodomain-like 40 114 IPR009057 -
Mepo4g04272 753 CDD START_ArGLABRA2_like 259 487 - -
Mepo4g04272 753 CDD homeodomain 56 114 IPR001356 GO:0003677
Mepo4g04272 753 Coils Coil 108 128 - -
Mepo4g04272 753 ProSiteProfiles START domain profile. 255 491 IPR002913 GO:0008289
Mepo4g04272 753 SMART START_1 264 488 IPR002913 GO:0008289
Mepo4g04272 753 MobiDBLite consensus disorder prediction 1 66 - -
Mepo4g04272 753 SUPERFAMILY Bet v1-like 256 488 - -
Mepo4g04272 753 FunFam Homeobox-leucine zipper protein HDG1 42 130 - -
Mepo4g04272 753 Pfam Homeodomain 57 112 IPR001356 GO:0003677
Mepo4g04272 753 Gene3D - 303 480 IPR023393 -
Mepo4g04272 753 Gene3D - 44 129 - -
Mepo4g04272 753 SMART HOX_1 55 118 IPR001356 GO:0003677
Mepo4g04272 753 SUPERFAMILY Bet v1-like 515 747 - -
Mepo4g04272 753 MobiDBLite consensus disorder prediction 18 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04272 Mepo-Chr4 52491318 52496759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04272 23 750 Homeobox Transcription Factor Family AT3G61150 60.766 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo4g04272 START 6.6e-46 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04272 K09338 - gmx:100794400 1209.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g01350 5 13910117 13917290 Mepo4g04272 4 52491318 52496759 ECH
Mepo4g04272 4 52491318 52496759 Mepo4g04272 4 52491318 52496759 ECH