Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04268 ATGGCTCCGTCGGCGGAACATAACGGTGAGTCTCAGAGATCCATTCCGACGCCGTTTCTCACCAAGACATATCACCTTGTGGATGAAACCGCTACCGACGATGTGATTTCGTGGAATGATACTGGAACAACGTTCATCGTTTGGAACCCTACAGTTTTCGCTAGGGATTTGCTTCCTAAATATTTTAAGCACAACAATTTCTCTAGCTTCGTTCGCCAACTCAATACTTATGGATTTAAAAAAGTTGTACCTGATCGGTGGGAATTTTCCAATGAATCTTTCCGAAAAGGCGAGGAACGGCTTCTCTGTGATATTCAGCGACGGAAAATCGTTTCAGCATTGCCGGCGGCAGCTTCAAATGCCGGCGCGACTGCAACAAAAACGGTCCCGACAGCAAAGCCTATCGCGTCCCCGTCAATATCGGGGGAGGAGCAGGTGATTTCTTCGAATTCCTCACCGTCGATTTCTCCGGCGGTGCTATTAGACGAGAACGAGAGGTTGAGAAAGGAGAACATGCAGTTAGCGAAGGAAATAGAGGACATGAAATCGCTCTACAACAATATATTCAATCTTCTGTCGAATTACGCGAATTCTCAAACGGAAGGCGGTGCGGATGGAAAAGAATGTTGCTCAACGGCGACGCCATCGAAGACGCTTTGTTTGTTACCGGAGAAGCGGTGCAACGGCGATGATGCGGCGGTGGAAGATAGAAACCTAAAGCTGTTTGGAATAGCGATTGATGCGAAGCGAGCGAGAGGAGAAGGACGGTGTATTGAGGATGATGTGGTGTTGAGCCTGAATCATTCTGTTCATGTGGACGTGAAATCCAAGCCGTTTGATTCAAGGAAAGGTGAAAAGAGGAAAATGATGCGGCTAAATCAGTGCTATAGAGCGAATCAGAGTGTGTGTAATTGA 915 0.4721 MAPSAEHNGESQRSIPTPFLTKTYHLVDETATDDVISWNDTGTTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFKKVVPDRWEFSNESFRKGEERLLCDIQRRKIVSALPAAASNAGATATKTVPTAKPIASPSISGEEQVISSNSSPSISPAVLLDENERLRKENMQLAKEIEDMKSLYNNIFNLLSNYANSQTEGGADGKECCSTATPSKTLCLLPEKRCNGDDAAVEDRNLKLFGIAIDAKRARGEGRCIEDDVVLSLNHSVHVDVKSKPFDSRKGEKRKMMRLNQCYRANQSVCN 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04268 304 Coils Coil 164 184 - -
Mepo4g04268 304 Pfam HSF-type DNA-binding 19 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 SUPERFAMILY "Winged helix" DNA-binding domain 16 108 IPR036390 -
Mepo4g04268 304 Gene3D - 11 109 IPR036388 -
Mepo4g04268 304 PRINTS Heat shock factor (HSF) domain signature 19 42 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 PRINTS Heat shock factor (HSF) domain signature 70 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 PRINTS Heat shock factor (HSF) domain signature 57 69 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 SMART hsfneu3 15 108 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 ProSitePatterns HSF-type DNA-binding domain signature. 58 82 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo4g04268 304 FunFam Heat stress transcription factor B-4 11 109 - -
Mepo4g04268 304 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 10 194 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04268 Mepo-Chr4 52453225 52454544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04268 11 304 HSF AT5G62020 44.516 2.18e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo4g04268 HSF_DNA-bind 4.7e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04268 K09419 - gmx:100780987 344.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04268 4 52453225 52454544 Mepo4g04268 4 52453225 52454544 ECH
Mepo7g01231 7 19833362 19834509 Mepo4g04268 4 52453225 52454544 PCT