LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g04222	ATGCCAGTTGCAAAACTTACTGCCTCAGGTACTCCCAATTTTATGAAACCGGAAGACGGAAATGATTCTTTGGATACATTGATAAGACAAGCGGTTGGAAAAGAACCATTCCTTTCCTTTCCTAGGGCTGGTGGTGACAGGCCAGCACAGTGGATTCAATTATTTCATGCTTTAGAACAGCAACAAGAAATTCCAGGGTGGCCTCTGTTCTCTCCTGCAAAGGTTCAACTACTAAAGTGTGACAAGTGTACCAAAGACAGAGAGTTTTGTTCACCCATTAATTATAGAAGGCATAAACGTGTACACCATCGGTTGAAAAAGCTTGATAAGGACTCTAAGATAAGTAGGGATCTTTTAGGGGCTTATTGGGATAAGCTCTCTGTAGAAGAGGCAAAGGAAGTTGTGTCATTTGAGAATGTGATGTTGGAGGAGGTTCCAGGGTCTTCAATTGTACAAGCTCTCTCAACTCTTAGAACTCAACAAGGATTTTACTCTTTTCCACCGTATTATCTCAGGGCTGGTTTCTCCCTTTTGGATATTGTTCAATCCAGGCCTTCTAGTTTTCCTATATCTTCCCAAAAGTTGTTCAATATTCTCGATGATTCCAGTGAAAATACATTTTTATGTGGAACAGCAGTGTCAATGCAAAGACATGTTTTTGATGGAGAGGCTGGAAAGATTGGGCTTGAAACAAAAAACCTAGTTGCTTGCACAAGTTTCTTGCTAGAGCAGAAATTGGTAAAGGCGTGGCTTGCAGACAAAGATGCCGAAGCATTGAGATGCCAGAAGCTGCTGGTGGAGGAGGAGGAAGCTGCTCAGAGAAGACAAGCTGAGGTTTTGGAGAGAAAACGCATGAAAAAGCTTAGGCTTAAAGAACAAAAGGCGAGGGACCAACTTGAAAATGACATAGAAGTTAAAGGGAGCATCAGAAGCGCAGGAGAGGAGGTATCGCCAGAGGAACCATCTTTGGCTGCATGTGACTTTGAAGCACATAGGGCATATGTATTTGCTGATCAAGCTTCTTCACCACTTGTAACTTATCATTGCCCAGACACCAATGAAGGTGTAGATGAGGATACACAGGTAGCATATGATTGCGACACTGATCAGAATGTGGAGCCACAAACATTACAATCGGATGCACGGTCAAGTTATGATTGTGACACTGATCGGAATTTAGAGAGACAAACATCACCCAAACATAATCCTCGACGCACAATGGCTGCCAGACGGCTAAGGCATCCTAAGTCGCAACGTACTATTGTCAATGGTTTGCATGCAAGCCAAAACTCTCAAAAGTGTAAGTCTGGGGTCATTCCAAAATATGGAAATGGAACCAATCGTGATAGTGGTAAAGTTTGGAGCCGGAAACCTAAACCAGAAATAGATTCAGTGATTTTAAAACCCAAACTGCACAAAGAACCAGATGAAGTTAAGACTCACGAAGTTTTGATCGGATCTGTATCTGTTACACTCATCAATTGCAGCCAATCAGAGAATAATATTGTCCAATCACAAGCAAACAGCTTCATAGAGAATTTGGCAAACCAAAATGTTGCTCAGGAGAAGCCAGTTAAACCTGACTCCTTTCATGGAGGCAGCAATCAGTTGGGAGTTAAGCTTTGGAGACCGGTGAGCCAGCACGAAACTAAAAACCCACCGCCACTTCAAAGTGTTGAGACAGAAGTTGATGTAGTCCATGGAAATGATGATCAAAATTTGTTGGTGCAAAGTAATTTAAGGTTGTGTGATATAGATGGAGGCAAAATGGGTCATGGGAACAAATCTCACGTCGGGCCAAAAGCAGATTCAGAAGGCTTTCGGCTGTCCAGCGATGCTGCAAAAGCCTTTCTTGCACAAAGATGGAAAGAAGCAATTTCGTCACATCATGTGGAATTAGTTATTTCACCTGATTCAGAAACTCATGGGTTCAAACCAGTCAAGGATTGCGCAACATCGGTTGCTAAATCCAAACCTAGAATGAGGCCTGAGAAAGGAATCAGGATAAAGTACATTCCAAGACTAAAAGCTGCAGCATAA	2040	0.424	MPVAKLTASGTPNFMKPEDGNDSLDTLIRQAVGKEPFLSFPRAGGDRPAQWIQLFHALEQQQEIPGWPLFSPAKVQLLKCDKCTKDREFCSPINYRRHKRVHHRLKKLDKDSKISRDLLGAYWDKLSVEEAKEVVSFENVMLEEVPGSSIVQALSTLRTQQGFYSFPPYYLRAGFSLLDIVQSRPSSFPISSQKLFNILDDSSENTFLCGTAVSMQRHVFDGEAGKIGLETKNLVACTSFLLEQKLVKAWLADKDAEALRCQKLLVEEEEAAQRRQAEVLERKRMKKLRLKEQKARDQLENDIEVKGSIRSAGEEVSPEEPSLAACDFEAHRAYVFADQASSPLVTYHCPDTNEGVDEDTQVAYDCDTDQNVEPQTLQSDARSSYDCDTDRNLERQTSPKHNPRRTMAARRLRHPKSQRTIVNGLHASQNSQKCKSGVIPKYGNGTNRDSGKVWSRKPKPEIDSVILKPKLHKEPDEVKTHEVLIGSVSVTLINCSQSENNIVQSQANSFIENLANQNVAQEKPVKPDSFHGGSNQLGVKLWRPVSQHETKNPPPLQSVETEVDVVHGNDDQNLLVQSNLRLCDIDGGKMGHGNKSHVGPKADSEGFRLSSDAAKAFLAQRWKEAISSHHVELVISPDSETHGFKPVKDCATSVAKSKPRMRPEKGIRIKYIPRLKAAA	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g04222	679	Coils	Coil	282	302	-	-
	Mepo4g04222	679	PANTHER	C2H2-LIKE ZINC FINGER PROTEIN	1	653	-	-
	Mepo4g04222	679	MobiDBLite	consensus disorder prediction	384	401	-	-
	Mepo4g04222	679	MobiDBLite	consensus disorder prediction	1	22	-	-
	Mepo4g04222	679	MobiDBLite	consensus disorder prediction	429	456	-	-
	Mepo4g04222	679	MobiDBLite	consensus disorder prediction	370	412	-	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g04222	18	674	C2H2 Transcription Factor Family	AT4G25610	41.518	1.18e-139	419

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Mepo4g04222		None	None	None

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo4g04222	4	52061585	52067427	Mepo4g04222	4	52061585	52067427	ECH