LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g04220	ATGCCTACATGGTGGGGAAAATCATCATCAAAAGAAACAAAGAAGAAAGCAGGTAAGGAAAGTATTATTGACACATTGCACAGAAAATTTAAATTTCCATCTGAGGGTAAACTAAGCACTATATCTGGAGGATCTCGTAGACGAAGCAATGACACAATTTCAGAGAAGGGGGACCGTTCTCCATCTGAATCAAGATCCCCTTCACCTTCCAAAGTAGCAAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAACCCCTTCCACTTCCGGGTTTGCACCCTTCAAGTTTAGGTCGAGTTGATTCTGAAATTAGTATATCAGCGAAATCGAGACTGGAAAAGCCCTCCAAGCCGTCATTATTTCTTCCACTTCCAAAACCTTCATGCATACGTTGTGGGCCAACTCCTGCAGATTTAGATGGAGATATGGTCAATGCTTCAGTCTTCAGTGATTGCTCTGCTGATAGTGACGAGCCAGCAGACTCACGCAACCGTAGTCCTCTGGCAACTGACTCGGAAACTGGTACAAGAACTGCTGCCGGCAGTCCTTCCAGCTTGGTGCTCAAGGATCAATCAACTGCTGTTTCCCAACCGAATTCGAGAGAAGTAAAAAAAACGGCAAATATTCTCAGTAATCACACACCTTCTACTTCACCAAAACGGAAGCCATTACGCCACCATGTTCCAAATCTTCAAGTTCCACCTCATGGTGTCTTCTATAGTGGTCCCGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGTACAGATCAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGCCATATCCAGAGATCAATTTCGTCGGATCTGGCCACTGCTCTAGTCCAGGTTCTGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCATTATTTTGGCAACCAAGTAGAGGTAGCCCTGAGTATTCTCCAATACCTAGCCCTAGAATGACTAGCCCTGGTCCAAGCTCAAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCAGGGGGAACACCAACTGAATCACAGACAGGACGGGTTGATGATGGAAAACAACAAAGTCATCGTTTGCCCCTCCCTCCTTTAACAGTTACCAATACCTCGCCATTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCGAGAAGTCCAGCTAGAGCAGATAGTCCAATGAGCTCTGGGTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGTACATTTGGGCACGTCTATATTGGCTTCAATAGTCAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTTTGGAAAGTGCTAAGCAATTGATGCAGGAAGTTCATTTATTAAGCCGTTTAAGACATCCAAATATTGTGCAGTATTATGGCTCTGAAACGGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGTTCCATACATAAACTTCTTCAAGATTATGGGCAATTTGGTGAACTAGCTATTCGAAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAAAATACTCTTCACAGGGACATCAAAGGAGCAAACATATTGGTAGATCCAAATGGTCGGGTCAAGGTTGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATACTGTCCATTGTCATTCAAAGGCAGTCCTTATTGGATGGCTCCTGAGGTTATAAAGAACTCCAAGGAATGCAGCCTTGGTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACGAAGCCTCCTTGGTCTCAGTATGAAGGGGTTGCTGCCATGTTCAAAATTGGTAATAGCAAGGAGCTCCCAACAATTCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGAATTATTAGACCACCCTTTTGTAAAAGGTGCTGCACCTTTGGAAAGACCTATTATGGTTCCCGAAACTTCAGACCCTATTTCTGGAATTACACATGGAACCAAAGCTCTGGGCATTGGACAAGGAAGGAATCTGTCTGCCTTGGATTCAGATAAACTCTTAGTTCATTCTTCTAGGGTTTTGAAAAATAATCCTCATGAAAGTGAAATCCATATTCAAAGGAATATATCTTGCCCAGTCTCTCCCATTGGAAGCCCACTTTTGAGGTCAAGATCACCACAGCAGAGGAGTGGGAGATTGTCTCCGTCTCCAATATCTAGCCCTCGGACCGCTTCTGGTGCATCCACGCCTCTCACTGGCGGCAGTGGTGCCATTCCATTCAGTAACCACTTAAAACAATCAGTTTACTTTCAAGAGTGTCTCGGAAGCATGCCGAAATCCCCAAACGGTGTCTACATTAACGGCTCTTCTCACCACGATTCAAATATCGACATTTTTCAAAGAATGCAAGCCGGGTCTCACATTAAATCAGAACTAGTCTCCAATGATAATGATGCTCTTGGCAAGCAGTTCGTAAGGTCTCCTCATGCAGAACCATATGACTTTCAGTCGGTCTTGGCTGATCGTGTTGGCCGGCAGCTTCTGGGGGATCATGTTAAGATTAACCCATCATTTGATCCAAGTCCCAGCTCGTCGATGCTCAACCGGACAAATGGTTTATGA	2700	0.4419	MPTWWGKSSSKETKKKAGKESIIDTLHRKFKFPSEGKLSTISGGSRRRSNDTISEKGDRSPSESRSPSPSKVARCQSFAERPHAQPLPLPGLHPSSLGRVDSEISISAKSRLEKPSKPSLFLPLPKPSCIRCGPTPADLDGDMVNASVFSDCSADSDEPADSRNRSPLATDSETGTRTAAGSPSSLVLKDQSTAVSQPNSREVKKTANILSNHTPSTSPKRKPLRHHVPNLQVPPHGVFYSGPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEINFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPIPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTGRVDDGKQQSHRLPLPPLTVTNTSPFSHSNSAATSPSMPRSPARADSPMSSGSRWKKGKLLGRGTFGHVYIGFNSQSGEMCAMKEVTLFSDDAKSLESAKQLMQEVHLLSRLRHPNIVQYYGSETVDDKLYIYLEYVSGGSIHKLLQDYGQFGELAIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPNGRVKVADFGMAKHITGQYCPLSFKGSPYWMAPEVIKNSKECSLGVDIWSLGCTVLEMATTKPPWSQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKGAAPLERPIMVPETSDPISGITHGTKALGIGQGRNLSALDSDKLLVHSSRVLKNNPHESEIHIQRNISCPVSPIGSPLLRSRSPQQRSGRLSPSPISSPRTASGASTPLTGGSGAIPFSNHLKQSVYFQECLGSMPKSPNGVYINGSSHHDSNIDIFQRMQAGSHIKSELVSNDNDALGKQFVRSPHAEPYDFQSVLADRVGRQLLGDHVKINPSFDPSPSSSMLNRTNGL	899

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	1	20	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	286	300	-	-
	Mepo4g04220	899	CDD	STKc_MEKK1_plant	410	667	-	-
	Mepo4g04220	899	Gene3D	Transferase(Phosphotransferase) domain 1	408	684	-	-
	Mepo4g04220	899	Pfam	Protein kinase domain	412	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo4g04220	899	PANTHER	MAP KINASE KINASE KINASE SSK2-RELATED-RELATED	59	677	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	33	100	-	-
	Mepo4g04220	899	ProSiteProfiles	Protein kinase domain profile.	411	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	149	228	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	742	780	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	370	404	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	108	127	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	746	780	-	-
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	286	412	-	-
	Mepo4g04220	899	ProSitePatterns	Protein kinases ATP-binding region signature.	417	440	IPR017441	GO:0005524
	Mepo4g04220	899	MobiDBLite	consensus disorder prediction	165	218	-	-
	Mepo4g04220	899	SMART	serkin_6	411	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Mepo4g04220	899	FunFam	Mitogen-activated protein kinase kinase kinase	409	691	-	-
	Mepo4g04220	899	SUPERFAMILY	Protein kinase-like (PK-like)	409	668	IPR011009	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g04220	Mepo-Chr4	52008506	52015518	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g04220	1	897	MAP Kinase Kinase Kinase	AT1G63700	57.982	0.0	882

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE11	Mepo4g04220		Pkinase	1.2e-71	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g04220	K20717		-	gmx:100797994	1476.84