Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04197 ATGGCCGAGGATTGGGATTTGTTTGCCATAGTTCGAAGTTGCCAATCAGCCACCAATACAACCACAACAGAAAATTCATTTACCACAACAAATACTATACCATCTTCCATTTCCACTTCTAATTTCAACGTAGAATTAGAATATGATGCATTTTCCTTTCCCAATGTAGTGCAACCTATAACCAATGAGCTTCAAGGTCTAAACCAATTATTGACATCTTTTACCCCCACCACCACCACTACTACTAGTGGTCATGGTATCAATCCCAATTCCCCTCCTGATATTGCAAAATACATTGGACAACAACAACACCATTATGTCCCTACTACTTCCTCTTCCATTTGGCCTCATTTTGTGCAAGAAACTTCCACTTCTAGCTTCAACATATTCCATAACCAACAATTACAACAACAACATAATCAACTACAAGCAATTCAGAAACAAGAATTTCAAGTACCCCAAAGCATCCAGCCTCAAACACCTAGATCAAGAAAAAGAAAAAGTCAACAAGGGAAAATGGTGTGCCATGTAACCGCAGATAACCTTTCAACAGATTTGTGGGCATGGCGAAAATATGGACAAAAACCCATTAAAGGTTCTCCATATCCAAGGAACTACTACAGATGTAGCAGTTCCAAAGGTTGTACCGCGCGAAAGCAAGTTGAAAGGAGCAACACTGATGCAGACATGTTCACTGTGACATACACAGGAGATCATAACCATGCAAGACCTACCCATCGGAACTCGCTAGCCGGAAGTACACGAACCAAGTCTCCAGTGACACATCCAACCACTTCAATTTCTGGTCAACCCAACAGCTCAACTTCTTCTTGCTCCTCTTTAGCACCAAACTCTTTTGGTGAAGAAGAAGAGGACATCGACATGGAAATTGAAACTGATGATGATGGTGAAGATAGTTGTGATATTCCTTCCTAA 936 0.4081 MAEDWDLFAIVRSCQSATNTTTTENSFTTTNTIPSSISTSNFNVELEYDAFSFPNVVQPITNELQGLNQLLTSFTPTTTTTTSGHGINPNSPPDIAKYIGQQQHHYVPTTSSSIWPHFVQETSTSSFNIFHNQQLQQQHNQLQAIQKQEFQVPQSIQPQTPRSRKRKSQQGKMVCHVTADNLSTDLWAWRKYGQKPIKGSPYPRNYYRCSSSKGCTARKQVERSNTDADMFTVTYTGDHNHARPTHRNSLAGSTRTKSPVTHPTTSISGQPNSSTSSCSSLAPNSFGEEEEDIDMEIETDDDGEDSCDIPS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04197 311 MobiDBLite consensus disorder prediction 287 311 - -
Mepo4g04197 311 MobiDBLite consensus disorder prediction 151 174 - -
Mepo4g04197 311 FunFam WRKY transcription factor 22 166 237 - -
Mepo4g04197 311 SUPERFAMILY WRKY DNA-binding domain 178 244 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g04197 311 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 4 278 IPR044810 GO:0003700
Mepo4g04197 311 SMART WRKY_cls 183 243 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g04197 311 Pfam WRKY DNA -binding domain 185 241 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo4g04197 311 MobiDBLite consensus disorder prediction 246 284 - -
Mepo4g04197 311 Gene3D WRKY domain 167 237 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo4g04197 311 MobiDBLite consensus disorder prediction 236 311 - -
Mepo4g04197 311 ProSiteProfiles WRKY domain profile. 178 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04197 Mepo-Chr4 51856304 51857855 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04197 162 266 WRKY Transcription Factor Family AT5G52830 77.064 3.95e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo4g04197 WRKY 9.6e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04197 - - mtr:11414845 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g03812 1 44365709 44367968 Mepo4g04197 4 51856304 51857855 ECH
Mepo3g02207 3 31781928 31783532 Mepo4g04197 4 51856304 51857855 ECH
Mepo1g04364 1 51287650 51292804 Mepo4g04197 4 51856304 51857855 ECH
Mepo4g04197 4 51856304 51857855 Mepo4g04197 4 51856304 51857855 ECH