Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04188 ATGATGGAACAGAAGCATGTTTTGTTGTTAGCAGCATTAGGTGTTGGGATTGGATTAGGTGTAGGAGTAGGAACATGGGTTGGTGAGAAAAATGTTTTGTTGTCAATATTTAGTGCTGTGATTGGGTTGATTGTAGGACTTGGAATATGGTTTGGTTTTGGATGTGATTCTGATGAGTCTAATCATATTTCTGAGAATCAAATTGTGAAGGGACTCAAGAAACTAGTCCTTGATGGAAAGGAGAGTAAAGTCACATTTGATGACTTTCCTTATTACTTAAGTGAAAAAAACAAAATTTTGTTGACAAGTGCTGGATATTTTCATTTAAGACAACATGACTTATCCAAGCACACCAGGAACCTTTCACCAGTAAGACAGGCTATTTTGCTTTCTGGACATGCAGAACATTATCATCATAAGCTTGCCGGAGCTTTAGCACATTGCTTTGAATCGAAGTTGCTGTCTCTAGATATTGCTCACTTTTCTTTGAAGATGCAGGGAAAATACGGATGTTCTAGAAAAGAACCATATTTTAAAAGGTCCATCTTTGAGGCAACTCGGGAGTTTGTGTCTGCTTTATTTGTTTCCCTGTCAATCCTCCCTTCAAAAGGCGCGATTAGAGCTCCTTCAAAGTCCACAAGCTGCTACTTTTTTGATGAAAAGCTTTTCCTACATTCACTCTACAAGGTCTTGGTTTCTATATCAGATGCTGGTTCTGTTATTTTATACATCAAGAATGTTGAGAAGGTCTTCCTTGGATCACCAAGGATGTACAGATTGTTCCAAAAGCTATTAAATAAACTTTCAGGATCAGTGTTGATACTCGGTTCCCGGCCTTATGACTTAAAATATAACTGTACCAAAGTCAATGAAAAACTCACTATGTTATTCCCTTACAACATCGAGATCACACCACCTCAAGATGAGACTCGTCTCAAAATCTGGAAAAGCCAACTAAAAAAGGCCATGAAAAAGACTCACTTGAAAGATTACACCACCCACATTGCTGAAGTGCTTGCAGCAAATGACGTTTATTGTGATGACTTGGATACAATTGACCATAATGACATGACAATACTCAGTAATCAGACCGAAGAGGTTGTGGCATCTGCAATTTTTCATCACTTGAAGGATGCCAAAAATCCAAAGTACCGAAATGGAATCCTAATTATATCAGCGAAGAGTTTGCGCCATGTACTGAGTCTGTTCCAGGAGGGTGAAAGTAGCGAGAAGGATAACAAGAAGACTAAAAAAGAATCAAAAAGGGATGATAGCAAAAAAGAAAAACCAAAAGAGTCAAAGAAAGACAGTGATATTAAAGCTTCTACAAAATCAGATAGTCCTGACAATGCCTTTGAGGAATGCATAAGACAAGAGCTTATCCCTGCAAACGAGATAAAGGTGACTTTTTCAGATATCGGTGCTTTGGATGATGTTAAAGAATCACTTCATGAAGCGGTTATGCTTCCCCTTAGAAGACCAGATCTATTCAAAGGCGATGGGGTTCTGAAGCCATGTAAAGGTGTATTGCTTTTTGGACCTCCTGGTACAGGAAAGACAATGCTTGCCAAGGCAATTGCAAATGAAGCTGGAGCAAGTTTCATCAATGTCTCTCCATCCACCATCACTTCAATGTGGCAAGGACAATCTGAAAAGAACGTCCGAGCTCTATTTTCGCTTGCGGCGAAGGTTGCCCCAACTATTATTTTCATTGATGAAGTTGATAGCATGCTTGGGCAACGGTCTAGCACTCGTGAGCACAACTCAATGAGAAGGGTCAAAAATGAATTCATGTCCCGTTGGGATGGACTATTGTCAAAACCTGATGAGAAAATTACCGTTCTTGCTGCAACCAACATGCCATTTGACCTTGATGAAGCAATTATCAGACGGTTTCAGCGCAGGATCATGGTTGGTCTTCCGTCTGCTGAAAACAGGGAAACAATCTTGAAAACTATTCTAGCTAAGGAAACATCTGAAAATATGAACTTCAAAGAGCTTTCAACTATGACCGAAGGATATAGTGGAAGTGATCTTAAGAACTTGTGCATGACTGCAACATATCGCCCCCTTAAGGAGCTAATACAACAGGAGAAGGAAAAAGAAATGAAAAAGAAGAAAAAGATGACAGAAGCTGAAATCTCAGAAGGCGCTTCCATTGCTACCGAAGAAGATAAAGAAGATCAAGTGATTGCCCTCAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAATAAGGTGACTGCAAGTTTTGCTGCTGAAGGATCAATAATGACCAGGTTGAAGGAATGGAATGATTTGTATGGAGAAGGAGGTTCAAGGAAGAAAGAGGAGCAGCTCAGTTATTTCTTTTAG 2358 0.3965 MMEQKHVLLLAALGVGIGLGVGVGTWVGEKNVLLSIFSAVIGLIVGLGIWFGFGCDSDESNHISENQIVKGLKKLVLDGKESKVTFDDFPYYLSEKNKILLTSAGYFHLRQHDLSKHTRNLSPVRQAILLSGHAEHYHHKLAGALAHCFESKLLSLDIAHFSLKMQGKYGCSRKEPYFKRSIFEATREFVSALFVSLSILPSKGAIRAPSKSTSCYFFDEKLFLHSLYKVLVSISDAGSVILYIKNVEKVFLGSPRMYRLFQKLLNKLSGSVLILGSRPYDLKYNCTKVNEKLTMLFPYNIEITPPQDETRLKIWKSQLKKAMKKTHLKDYTTHIAEVLAANDVYCDDLDTIDHNDMTILSNQTEEVVASAIFHHLKDAKNPKYRNGILIISAKSLRHVLSLFQEGESSEKDNKKTKKESKRDDSKKEKPKESKKDSDIKASTKSDSPDNAFEECIRQELIPANEIKVTFSDIGALDDVKESLHEAVMLPLRRPDLFKGDGVLKPCKGVLLFGPPGTGKTMLAKAIANEAGASFINVSPSTITSMWQGQSEKNVRALFSLAAKVAPTIIFIDEVDSMLGQRSSTREHNSMRRVKNEFMSRWDGLLSKPDEKITVLAATNMPFDLDEAIIRRFQRRIMVGLPSAENRETILKTILAKETSENMNFKELSTMTEGYSGSDLKNLCMTATYRPLKELIQQEKEKEMKKKKKMTEAEISEGASIATEEDKEDQVIALRPLNMEDMRQAKNKVTASFAAEGSIMTRLKEWNDLYGEGGSRKKEEQLSYFF 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04188 785 Gene3D - 641 714 - -
Mepo4g04188 785 Coils Coil 691 712 - -
Mepo4g04188 785 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 70 784 - -
Mepo4g04188 785 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 467 646 - -
Mepo4g04188 785 Pfam AAA+ lid domain 663 704 IPR041569 -
Mepo4g04188 785 Gene3D - 467 640 IPR027417 -
Mepo4g04188 785 Pfam ATPase family associated with various cellular activities (AAA) 509 639 IPR003959 GO:0005524|GO:0016887
Mepo4g04188 785 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 466 702 IPR027417 -
Mepo4g04188 785 MobiDBLite consensus disorder prediction 405 451 - -
Mepo4g04188 785 ProSitePatterns AAA-protein family signature. 612 631 IPR003960 GO:0005524|GO:0016887
Mepo4g04188 785 MobiDBLite consensus disorder prediction 405 443 - -
Mepo4g04188 785 SMART AAA_5 505 642 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04188 Mepo-Chr4 51795076 51801763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04188 467 747 Calmodulin-binding Proteins AT3G56690 37.193 2.70e-45 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04188 - - mtr:11428492 1389.79