Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04183 ATGTCAGAATCAGGCAACTTCATCCTTCACAACATAAACAACCACCCTATATGGCAGAGTTTCTCTCAACCTTCTAACACACTCCTTCCAAACCAGCCTCTAACAGTTTCTTCAGAATTAACATCACCAAAATCTTCCTCTCATGGTGGCTACTATGCTCTCAAAATGCTTCAACAACCAACTTCTTTAAGCCTTGCACTAACTTACAATCTTCCAGAAACTTACCAAACATTGGATGAAAATGAATCATCATATGCTAACTATTCTTATTGGCAAGGTCCTGAGATTTCCAATGTAACTGGCGAAGTTATTGCGGTTTTAGATCAAGCTGGAAGCTTTGGAATTGTATATGGAGATTCATCTGATGGTGCAGTTTATGTGTATAAGAATGATAATGATGATGCAGGTTTGGCTTCTGCAATTCATCAGTCTACACCGTTAACAGTTCTTCGGAGACTAACACTCGAAGAGAACGGAAACTTGCGGCTATATCGTTGGGAAAATGTAAATGGATCGAAACAATGGGTGACACAATGGGCTGCAGTTTCAAATCCATGTGATATTGGAGGAATTTGTGGTAATGGAGTTTGTAAATTGGATAGAACTAAGACAAATGCATCTTGCACTTGTTTGCCAGGAACTTCTAAAGTTGGTAGAGATGGACAATGTTATGAGAATTCTTCTCTTGTTGGAAAATGTACTAATGGCCAAAATGAAAACATGACATCAAAGTTTAGGATTTCAATGGTGCAGCAAACTAATTATTATTTTTCTGAATCATCAATAATAGCTAATTTTAGTGAGAGTGATGTTTCTTCTTTATCAAAATGCGGTGATGCATGTTTATCAGATTGTGATTGCATTGCTTCTGTTTATGGACTAAATGAGGAGAGACCATTTTGTTGGGTGTTGAGGAGTTTAAATTTTGGTGGGTTTGAAGATACAAGCTCTACCTTGTTTGTGAAGGTTAGAGCCAATAGTTCATGGACACCAGAAGGACAAGATGGAAGGTCTAGTAGTTCTTCTGATGGAATGGGGAGTGCTAAGGAGAAGGCTGTGATTATTCCAATTGTTTTAGGAATGATAGTTCTCATTTTTTTGCTATGTATGTTACTATATTACAGTGTTCACAGAAAAAGAACTTTGAAAAGAGAAATGGAAAGTTCATTGGTCTTATCAGGTGCTCCAATGAATTTTACATATCGCGCTTTGCAAATCAGGACGAGTAACTTTTCACAGCTTCTAGGAACAGGCGAGTGTGGATTTGGAAGTGTATATAAAGGAAGCCTAGGAGATGGTACTCTAATTGCAGTGAAGAAACTTGACAAGATTTTGCCTCACGGAGAGAAAGAATTTATCACTGAAGTAAACACAATTGGCTCAATGCATCATATGAATTTGGTTCGTCTATGCGGCTTTTGTTCTGAGGGACCACACAGGCTTCTGGTGTACGAGTTCATGAAGAATGGTTCATTGGATAAATGGATCTTCCCTTCATATCGAGGGCGAGATAGATTGCTAGATTGGCAAACTCGTTTCGATATAGCCATAAATACTGCACAGGGGATTGCATACTTTCATGAGCAATGCAGAAATAGGATAATACATTGTGATATCAAACCAGAAAATATATTGTTAGATGAAAACTTTTGTCCCAAGGTATCCGATTTTGGACTGGCCAAATTAATGGCAAGGGAACACTCTCAAGTGGTAACAATGGTTAGAGGTACTAGAGGTTATTTGGCGCCTGAATGGGTTAGTAATCGACCTATAACTGTAAAAGCAGATGTTTACAGCTATGGTATGCTTCTTTTAGAAATCATTGGTGGTAGGAGAAATCTTGACTTGTCCTTTGATGCAGAAGACTTCTTCTATCCTGGTTGGGCTTACAAGGAGATGACAAATGGATCAGCAATCAAAGTGGCAGATAGAAGTTTAAATGGAGCAGTTGATGAAGAAGAGCTAATGAGAGCTTTGAAAATTGCCTTTTGGTGCATACAAGATGATGTTTCCATGAGACCACCAATGGGAGAAGTGGTAAGATTGCTTGAGGGTCAAGGTTCAAATAGCATAAATATGCCACCAATGCCACAAACAGTACTAGAGTTAATTGAGGAAGGGTTGGACCATGTCTACAAAGCTATGAAAAGAGAGTATAACCACTATAGTTCATTCACCATTACCAGTCATCTTACATCTCATGCAACATGTAGCAATTCCACAATGTCACCAAGATAG 2238 0.3847 MSESGNFILHNINNHPIWQSFSQPSNTLLPNQPLTVSSELTSPKSSSHGGYYALKMLQQPTSLSLALTYNLPETYQTLDENESSYANYSYWQGPEISNVTGEVIAVLDQAGSFGIVYGDSSDGAVYVYKNDNDDAGLASAIHQSTPLTVLRRLTLEENGNLRLYRWENVNGSKQWVTQWAAVSNPCDIGGICGNGVCKLDRTKTNASCTCLPGTSKVGRDGQCYENSSLVGKCTNGQNENMTSKFRISMVQQTNYYFSESSIIANFSESDVSSLSKCGDACLSDCDCIASVYGLNEERPFCWVLRSLNFGGFEDTSSTLFVKVRANSSWTPEGQDGRSSSSSDGMGSAKEKAVIIPIVLGMIVLIFLLCMLLYYSVHRKRTLKREMESSLVLSGAPMNFTYRALQIRTSNFSQLLGTGECGFGSVYKGSLGDGTLIAVKKLDKILPHGEKEFITEVNTIGSMHHMNLVRLCGFCSEGPHRLLVYEFMKNGSLDKWIFPSYRGRDRLLDWQTRFDIAINTAQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMAREHSQVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDLSFDAEDFFYPGWAYKEMTNGSAIKVADRSLNGAVDEEELMRALKIAFWCIQDDVSMRPPMGEVVRLLEGQGSNSINMPPMPQTVLELIEEGLDHVYKAMKREYNHYSSFTITSHLTSHATCSNSTMSPR 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04183 745 FunFam S-receptor-like serine/threonine-protein kinase 378 486 - -
Mepo4g04183 745 PIRSF SRK 1 736 IPR024171 GO:0004674
Mepo4g04183 745 SUPERFAMILY Protein kinase-like (PK-like) 387 684 IPR011009 -
Mepo4g04183 745 CDD STKc_IRAK 415 685 - -
Mepo4g04183 745 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 38 IPR036426 -
Mepo4g04183 745 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 487 695 - -
Mepo4g04183 745 ProSiteProfiles Protein kinase domain profile. 411 696 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04183 745 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Mepo4g04183 745 Pfam Protein kinase domain 413 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04183 745 Gene3D Transferase(Phosphotransferase) domain 1 487 694 - -
Mepo4g04183 745 Gene3D Phosphorylase Kinase; domain 1 373 486 - -
Mepo4g04183 745 SMART serkin_6 409 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04183 745 PANTHER OS07G0415500 PROTEIN 2 697 - -
Mepo4g04183 745 Pfam S-locus glycoprotein domain 133 213 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04183 Mepo-Chr4 51751530 51754646 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04183 380 695 Receptor kinase-like Gene Family AT5G20050 43.636 9.65e-76 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Mepo4g04183 Pkinase 6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04183 - - tpra:123904109 1441.4