Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04173 ATGCTCAGTCACACTTTGATCATCCTCCATTTCTTTCTCTTCACCATTTTCATTCTCCCTTCACTTTCTCTTCCTTCACAAAACATCACACTCTTTGGTGATGCTTCCTACACAGACACTGCCATTACTCTCACCAAACAACAACACACTTGTCTTTCTTCTTCAACTTCTGGAATTGGAAGAGCTTTCTACCTCTATCCTGTTCGTTTTCTTGATCCTTTAACTAACTCAACCGCTTCTTTTTCATGTCGTTTCTCTTTCTCAATCCTTTCTTCACCTTCTTGTCCTTCTTCTTCTGATGGCATTGCTTTTCTCATTTCTTCAACCACTGATTTCTCATCTCTCTCTAATGGTTACATGGGCCTTCCTCATTCTGATCAAGATTCTTACTTTGCCGTTGAATTTGATACGAGTTTTGATCCTTCTCTTGGTGACATTAATGGAAACCACGTTGGCATTGATCTTGACAGTGTTGCTTCTTTTGCTTCTGCTGATCTTCTTTCACGTCGGATTGATTTGAAAAGTGGGAAAATCATCAATGCATGGATTGAGTATAGAGATGATATGAAAATGGTTCGTGTTTGGGTTAGTTACTCTTCAACTAGACCTCCGACACCGATTATTGCTTCATTCATTGATCTTTCTGAGAGATTCAAAGAGTTTATGCATGTTGGTTTCTCTGCTTCAGATGGAAAAGGTTCAAGTATTCATCATGTTCATCATTGGCAGTTCAAAACTTTGAGTTATTCTCATTCTGTTAGTCCTATGGATAATGTAGAAGAAGGTGACTGTTTCTTGTGTTATGCCAGTGATTCAAAACCATCGAAGAAAAAAGGTGAAAATTCTAGAAGGAATTTTTTTGGTGAGATAGCTCTTGGAATTGGTGGAATAACAGCTTTTGGTGTGTCTGCATTGGTATTAGGAGTTGTGATATGTGTTTTCATTAAAAGGAAAAAAGGGGGTGTAATTAGAAAGATTAAGGAAGGTCAAAGTTGTAGGTTTCAGACAAATAAAGTTCCAGTGAAGTTATCACTTTCAGAGATTACATCAGCTACAATGGGATTTAATAGAGATAGACTAGTTGGTGAAGGTGCATCAGCAAAAGTTTATAAAGGGTCACTTCCATTTGGAGGTGATGTAGCTGTCAAGAGATTCGAAAAAATCGATGAATTGGACCGCTTACACAATCCTTTTGCAACCGAGTTCGCTACAATGGTAGGTTGCTTGCGGCACAAGAATCTGGTTCAGCTTAAAGGGTGGTGTTGTGAAGGGAATGAATTGGTTTTGGTTTATGAGTATCTACCAAATGGAAGCCTTGATAAAGTTCTGCATAGGAATTTAAGTTCTTCATTTGTTCTTTCATGGAAACAAAGAGTTAATATAGTTCTAGGTGTTGCCGCTGCTCTTACCTATCTTCATGAAGAATGTGAGAGACAAATCATTCATAGAGATGTGAAGACATGTAACATAATGCTCGATGTTGATTTCAATGCAAAGCTTGGTGATTTTGGACTAGCAGAAGTTTATGAACATAGTTCTAGTACAAGGGATGCTACTATACCAGCAGGAACAATGGGATATCTCGCACCCGAATATGTTTATTCGGGTGTTCCAACCGTGAAGACCGATGTATATAGTTTTGGTGTCGTGATAATTGAAGTCGCGACTGGGAGGAAGCCTGTTGGAGACGACGGAACTGTCATTGGTGACTATGTTTGGAATTTGTGGGAAAAGAATAGACTCGTTGAGGCGGCCGATCCGAAATTGATGGGGGAATTTGATGTAGTTGAGATGGAGAGGATGTTATTGGTAGGGCTTGTTTGTGTGCATCCTGATTATGAGAAGAGGCCTAGAGTTAGAGATGCAGCTAGAATGATAAAGAAAGAAGCACCACTTCCATTGTTGCCTACAACTAAACCATGGGTGAGAATTATGCCTGTTTGTCCGAATGACACACCTGAAACACAAGATGTTGGTGATTGGGTTAGTAATGATGAGGCTCCTTATTTGACTCCTAGGAGCCAATTTTACTAG 2034 0.3938 MLSHTLIILHFFLFTIFILPSLSLPSQNITLFGDASYTDTAITLTKQQHTCLSSSTSGIGRAFYLYPVRFLDPLTNSTASFSCRFSFSILSSPSCPSSSDGIAFLISSTTDFSSLSNGYMGLPHSDQDSYFAVEFDTSFDPSLGDINGNHVGIDLDSVASFASADLLSRRIDLKSGKIINAWIEYRDDMKMVRVWVSYSSTRPPTPIIASFIDLSERFKEFMHVGFSASDGKGSSIHHVHHWQFKTLSYSHSVSPMDNVEEGDCFLCYASDSKPSKKKGENSRRNFFGEIALGIGGITAFGVSALVLGVVICVFIKRKKGGVIRKIKEGQSCRFQTNKVPVKLSLSEITSATMGFNRDRLVGEGASAKVYKGSLPFGGDVAVKRFEKIDELDRLHNPFATEFATMVGCLRHKNLVQLKGWCCEGNELVLVYEYLPNGSLDKVLHRNLSSSFVLSWKQRVNIVLGVAAALTYLHEECERQIIHRDVKTCNIMLDVDFNAKLGDFGLAEVYEHSSSTRDATIPAGTMGYLAPEYVYSGVPTVKTDVYSFGVVIIEVATGRKPVGDDGTVIGDYVWNLWEKNRLVEAADPKLMGEFDVVEMERMLLVGLVCVHPDYEKRPRVRDAARMIKKEAPLPLLPTTKPWVRIMPVCPNDTPETQDVGDWVSNDEAPYLTPRSQFY 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04173 677 SUPERFAMILY Concanavalin A-like lectins/glucanases 17 248 IPR013320 -
Mepo4g04173 677 Pfam Protein kinase domain 356 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04173 677 ProSitePatterns Protein kinases ATP-binding region signature. 361 383 IPR017441 GO:0005524
Mepo4g04173 677 Pfam Legume lectin domain 12 247 IPR001220 GO:0030246
Mepo4g04173 677 CDD lectin_legume_LecRK_Arcelin_ConA 17 246 IPR001220 GO:0030246
Mepo4g04173 677 FunFam L-type lectin-domain containing receptor kinase S.6 317 433 - -
Mepo4g04173 677 PANTHER - 43 633 - -
Mepo4g04173 677 Gene3D Transferase(Phosphotransferase) domain 1 434 631 - -
Mepo4g04173 677 SMART serkin_6 355 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04173 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 480 492 IPR008271 GO:0004672|GO:0006468
Mepo4g04173 677 Gene3D - 14 260 - -
Mepo4g04173 677 SUPERFAMILY Protein kinase-like (PK-like) 337 625 IPR011009 -
Mepo4g04173 677 ProSiteProfiles Protein kinase domain profile. 355 635 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04173 677 Gene3D Phosphorylase Kinase; domain 1 318 433 - -
Mepo4g04173 677 FunFam L-type lectin-domain containing receptor kinase VIII.1 434 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04173 Mepo-Chr4 51664393 51666426 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04173 4 676 Receptor kinase-like Gene Family AT5G42120 54.077 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mepo4g04173 Pkinase 5.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04173 - - lang:109346768 959.518