Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04169 ATGGATTTACTTGAAGGTGTTGGTGAGAGTTCATCGCCACCGCGTTCATTCGGAGGCGGTTACAGTAACTACGATATCAGAACCGACGTTTATAACCGTTTGGTTGAAACCGGTCACGAACAAGCCGTATCGAATCCGGAGTTTCGTGAACAACTTGATTCTCACTTCAATCGTTTGCCTCCAAGTTATGGACTTGATGTGAATGTTGATAGAGCTGAAGATGTTTTACTTCATAGGAGTCTTCTTGATTTGGCAAGAGATCCTGATAAGCGTCCCGTTTACCATATACGTTTATTGGAGAATATTGCTACTAGGACAGATGGTGAAGATCAAGAAATTGTTAATACTCATACTCGCCCCGAGTCTTCTTCTCATGCAACAAATGGGGGAGTCATAGCATCTAATAAGAGGACAAGAGATCTGGCAACTGAGTTTGAGACTTACTCGAAGCTTGAGGATCTAAATTTGGATGTTATGAAGAACTCCAAGGATACAAAAGAAAAATTTGTAACTGACAGCTTTTCCCAGAGGCATGAACATTCAAGTGTCCCAGTTCATGAAATAATATTTTCTGCTGTTGACAAACCAAAGCTTTTAAGTCAGCTGTCCGCATTGCTGTCTGATATCGGGCTTAACATCCGTGAAGCACATGTATTTTCCACAACTGATGGATACTCCCTTGATGTTTTTGTGGTGGATGGATGGCCACTAGAGGAAACCAATGGTTTGTATGCTGCTATGGAAAAAGCTGTAGCAAGGAGTGAGGGGTCATGGTCTCATTCTTCAAATTCTCATTCAGCTGTGGAGAAAGCCTTAGCAGCAGAAGGAAAATCTGGAGACTGGGAAATAGACAGGAGGTCATTAAAGATAGGAGAGAAAATAGCATCTGGATCCTGTGGAGATTTGTATCATGGAGTTTATCTTGGTGAAGATGTTGCTGTTAAGGTTCTGAAATCTGATCAACTGAATGATGCCTTAGAGGACGAGTTTACTCAAGAAATAGCAATTTTGAGACAGGTAGAACATAAAAATGTTGTTCGTTTCATTGGTGCATGCACAAAGTGTCCACATTTGTGCATAGTAACAGAGTATATGACTGGGGGAAGTCTGTATGATTACTTGCACAAAAATCATAATGTCTTGGAGCTGTCTCAATTACTCAAGTTCGCAATTGATGTCTGCAAGGGAATGGAGTATTTGCATGGAAACAACATAATTCACAGGGATCTGAAGACAGCCAATTTGCTGATGGATACTCACAATGTTGTTAAAGTGGCAGATTTTGGAGTTGCCCGGTTCCTGATTCAGGGGGGAGTGATGACTGCAGAAACTGGAACCTATAGATGGATGGCTCCAGAGGTCATAAACCACCAGCCTTATGATCAAAAGGCAGATGTGTTCAGTTTTTCAATAGTCCTATGGGAACTAGTGACAGCAAAGATACCATATGATACCATGACTCCACTACAAGCTGCTTTGGGTGTGAGACAGGGGCTGCGACCAGAACTTCCAAAGAACGGGCACCCTAAACTATTAGATTTGATGCAAAGATGTTGGGAAGCAGTTCCTAGCAGTCGTCCATCCTTCAATGAGATAAGAGTTGAACTTGAAAATCTTTTGCTAGAAGTGGAGAATTATTCAGAAGTTAATGGTGCTTAA 1659 0.4159 MDLLEGVGESSSPPRSFGGGYSNYDIRTDVYNRLVETGHEQAVSNPEFREQLDSHFNRLPPSYGLDVNVDRAEDVLLHRSLLDLARDPDKRPVYHIRLLENIATRTDGEDQEIVNTHTRPESSSHATNGGVIASNKRTRDLATEFETYSKLEDLNLDVMKNSKDTKEKFVTDSFSQRHEHSSVPVHEIIFSAVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPLEETNGLYAAMEKAVARSEGSWSHSSNSHSAVEKALAAEGKSGDWEIDRRSLKIGEKIASGSCGDLYHGVYLGEDVAVKVLKSDQLNDALEDEFTQEIAILRQVEHKNVVRFIGACTKCPHLCIVTEYMTGGSLYDYLHKNHNVLELSQLLKFAIDVCKGMEYLHGNNIIHRDLKTANLLMDTHNVVKVADFGVARFLIQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKIPYDTMTPLQAALGVRQGLRPELPKNGHPKLLDLMQRCWEAVPSSRPSFNEIRVELENLLLEVENYSEVNGA 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04169 552 SMART serkin_6 288 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04169 552 MobiDBLite consensus disorder prediction 1 20 - -
Mepo4g04169 552 FunFam Serine/threonine-protein kinase isoform 1 278 366 - -
Mepo4g04169 552 Coils Coil 529 549 - -
Mepo4g04169 552 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 183 539 - -
Mepo4g04169 552 SUPERFAMILY Protein kinase-like (PK-like) 277 541 IPR011009 -
Mepo4g04169 552 ProSiteProfiles ACT domain profile. 187 259 IPR002912 -
Mepo4g04169 552 Gene3D Phosphorylase Kinase; domain 1 277 366 - -
Mepo4g04169 552 PRINTS Tyrosine kinase catalytic domain signature 362 375 IPR001245 GO:0004672|GO:0006468
Mepo4g04169 552 PRINTS Tyrosine kinase catalytic domain signature 445 455 IPR001245 GO:0004672|GO:0006468
Mepo4g04169 552 PRINTS Tyrosine kinase catalytic domain signature 464 486 IPR001245 GO:0004672|GO:0006468
Mepo4g04169 552 PRINTS Tyrosine kinase catalytic domain signature 507 529 IPR001245 GO:0004672|GO:0006468
Mepo4g04169 552 PRINTS Tyrosine kinase catalytic domain signature 399 417 IPR001245 GO:0004672|GO:0006468
Mepo4g04169 552 Pfam ACT domain 186 233 IPR002912 -
Mepo4g04169 552 CDD STKc_MAP3K-like 294 532 - -
Mepo4g04169 552 ProSiteProfiles Protein kinase domain profile. 288 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04169 552 Gene3D Transferase(Phosphotransferase) domain 1 367 550 - -
Mepo4g04169 552 SUPERFAMILY ACT-like 186 254 IPR045865 -
Mepo4g04169 552 ProSitePatterns Serine/Threonine protein kinases active-site signature. 405 417 IPR008271 GO:0004672|GO:0006468
Mepo4g04169 552 Pfam Protein tyrosine and serine/threonine kinase 288 535 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04169 Mepo-Chr4 51566091 51579268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04169 25 543 MAP Kinase Kinase Kinase AT2G17700 50.940 5.22e-180 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Mepo4g04169 PK_Tyr_Ser-Thr 5.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04169 - - gmx:100797987 927.546