Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04166 ATGAATGTCGTCGGAGTTCCGCCGGATACGGCAGAAAACCACCATAACCCCGATAGCAATAACACCATCTATTTCGATGAAACATTGGATCACTTGCTTCACCATGAGCTTAATGATCTCGATTTTGTTGAATTCTCATTACAGCGTCCGCCACTGCTGCCAAACATAATGGAGATGCCGCCGATTGATTCCATTCCTGCAGAGGCAGAGCCACCACAACTTCCGAGCTTGACTGTGGCAGGCGCAGGAGCTGACCCCGAAGGAAAAGGTGGTGTAGGGAATGTGATGAATGTTAGACATCATAGAAAAAGTTTTACCGTTGGTGGGCCCTCAATATCTTTGTCTTTGAAGAAGAAGGCCATACCACCTGAAATGCTCGCGGAGATTGCAGCAGTCCATCCTAAGAGAGCAAAGAGGATTCTTGCTAATAGGGATGCTGCTAAAAGATCTAAGGAGAAGAGGAAACATTATGAAAAAGAGTTGGTAAAGATGGTGGATTCACTTCAGATTCAAGCAGATAACGCAACCGCAGAGCGTGTGATTGCAATGAATGAAGCTATGGAATTAGCAGACGGGAACAATAAGATCAAAGAACATATACTGTCCGATATAGAAAATCAAGAAAAGAAGAGAGCTTTCCTAGAAAAGTTAAAAGAAGAAAGGGATATCCTCAAGATGCAAATTCAAGAACAAAGAACTACCATTGATTCTTCTTCTGGTGAATTACCCTCTCAATCTCAGAGTCAGGTTCCTCACCAGTCACAACTCTACATACCGCAGTTGCCGCCTCTTAGTCCTGATCCACCATCTCCCATCGTTGGTCCGCCTTTCGATGATCATTTTATCGACTTTTCAAACTACAATCCGTTTGACTAG 876 0.4384 MNVVGVPPDTAENHHNPDSNNTIYFDETLDHLLHHELNDLDFVEFSLQRPPLLPNIMEMPPIDSIPAEAEPPQLPSLTVAGAGADPEGKGGVGNVMNVRHHRKSFTVGGPSISLSLKKKAIPPEMLAEIAAVHPKRAKRILANRDAAKRSKEKRKHYEKELVKMVDSLQIQADNATAERVIAMNEAMELADGNNKIKEHILSDIENQEKKRAFLEKLKEERDILKMQIQEQRTTIDSSSGELPSQSQSQVPHQSQLYIPQLPPLSPDPPSPIVGPPFDDHFIDFSNYNPFD 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04166 291 Gene3D - 134 192 - -
Mepo4g04166 291 SMART brlzneu 131 195 IPR004827 GO:0003700|GO:0006355
Mepo4g04166 291 Pfam Basic region leucine zipper 135 169 IPR004827 GO:0003700|GO:0006355
Mepo4g04166 291 MobiDBLite consensus disorder prediction 232 278 - -
Mepo4g04166 291 SUPERFAMILY Leucine zipper domain 135 189 IPR046347 GO:0003700|GO:0006355
Mepo4g04166 291 CDD bZIP_plant_GBF1 136 185 IPR045314 GO:0003700|GO:0006355
Mepo4g04166 291 Coils Coil 158 185 - -
Mepo4g04166 291 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 107 255 - -
Mepo4g04166 291 Coils Coil 197 234 - -
Mepo4g04166 291 MobiDBLite consensus disorder prediction 232 260 - -
Mepo4g04166 291 MobiDBLite consensus disorder prediction 261 275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04166 Mepo-Chr4 51538784 51541695 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04166 88 230 bZIP Transcription Factor Family AT2G40620 39.041 5.08e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mepo4g04166 bZIP_2 7.9e-05 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04166 - K20557 mtr:11414831 405.986