Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04163 ATGGGGAAGAAGAAGCCAGCAATCCGCGACGACGAGAATCCTCCGCCGCAACAAGGCGGTGGCAAATCGAAGAAGAAGGCCCCGGTTATCGATGACGATGAATATTCTATCGGAGTGGAGGTGTCTGAGGATGCGGCTCCGGTTGCGGTGGAAGAGAAACCCGTGAAAAAGAAAGGTAAGAAAGGTAATGCTAAATCGAAAAAAGATAATGATGATGATTTTGATGATGATGTTGTTGTTGATGATGATGATGTGAATGAAATTGTTTTTGCTGGGAAGAAAAAAGGGAAATCGAAAAAAAGTGGTGGTGGTAGTAGTGGTGGAAGTGTGTTTGCTTCTGGATTTGGTGTGCTTGGTGATGAGGAGGATGTTGATAATGATGATGAGGAGAAATCGGAGGTAACCGGTGAGGGCGATGATGATGAGGATGAACCTGTTGTTAGCTTTACAGGGAAGAAGAAATCCTCGAAGGGTTCAAAGAAAGGTGGTGGTGGTGGAAGTGTGTTTACGGCTGCAGCTGGTTTTGGTTTGCTTGGGGATGAGGAAGATGTTGATAATGATGATGGTGAGGAGAAATCTGATGAGGATGAACCAGTTGTTTTTTTGGGGAAGAAGAAGTCCTCAAAGGGTTCGAAGAAAGGGGCAAGTAGTTTGTTCAGTGCATTAGATGAGAATGATGATGGAGAGGAGGAGAGTAAGAATGAAAAGGTAGAAGATGATGATGATGATGATGATGAACCAATCACTTTCTCGGGTAAGAAAAAGAAGTCATCAAAGGGTTCGAAGAAGGCGGGTGGTTCATTGAGTAAAGCTATTCCGGAGGAAGATAGTGTTTCTGTATCTGAGTCTGCTAAAGGTGGTGATGATGATAAAGATGAGGATGATGTTTCTTTTGCATTTACTGGTAAAAAGAAGTCTTCTAAAAAGAAAAGTGGTAGTGCTGCTGCCAAAATGAATGATGAAATCGAGTTTGGGAGTGAAAGTGTAAATGTTGTTGAGGCTGAGAAGCCTAGTGTCGACAATGGTAATATAAGTAAGAGTGAAGAGGTCGTTGGAACTTCCAAAAATAAGAAAAAGAATAAGAAGAAGAGTGGGAGGACTAAAGAAGAGGAGGATGATTTAGATAAGCTTCTTGCAGAGCTTGGCGAAGCCCCTGCTACAGCACAACCTGCTGCGGCTCCTCCTCAGCAGGATGATAAAGTTCAGCCGGTTCCTGTAGTAGGTTCTGCCCCTGGTGCTTCAGGAGAAAAGGAGGGAGAAGATGAGACTGTAGAGTCAGCTGCCGCAAAAAAGAAGAAAAAGAAGAAGGAAAAAGAAAAGGAGAAGAAGGCAGCGGCAGCAGCAGCTGGAAGTGCACCGGTAGTTGAAGCTGTAGAAGAGAAAGCTGAGGCAATTGAACCGAAGAAAAATGATTCGAAGACCAAAGCGGCTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAACTACTGGCTAGAAGAAAAGAGGCTGAAGAAAAAAAGAAAAAGGAAGAGGAAGAGAAGCAAAGGAAAGAAGAAGAGGAGCGACGAAGGATAGAGGAACTTGAGAGACAGGCAGAAGAGGCTAAACGTAGAAAGAAGGAAAAAGAAAAGGAGAAACTCCTGAAAAAGAAGCAGGAAGGTAAATTGTTAACTGGTAAGCAGAAAGAAGAAGCCCGGCGTTTGGAGGCAATGAGGAGGCAGATTCTCAATAGCACAGGGGGTGTGACTCTTCCTGGCGCGGACACCGGTGGACCATCTAAAAAACCTATTTATCAGACAAAGAAAGGGAAATCAACAAATCGAAATCATAATGGTGCCGCTGCTGTCAAGACAGAGGAAAATGTTGAAGCAACGGAAACTACTGCTGATTTAGATACAGAGGAACTGGAAAAGGTTGAAGAAGTGGAGTCGGTGCAGATGGAGGACAAAGCTGAACTTCCTGAAGTTGTTGAAGAAGTAGTGGATGAAGATGATGATGTTGAGGATGAATGGGACGCAAAAAGCTGGGATGATGTCAATCTGAATGATAGGGGTGCATTTGCTGATGAAGAAGTTGACTCCGAGCCTGAACCAATTGTCAAAAAAGAGATTAAAAATGGCATACCTTCTAAAAATGCTGGTGCTACAAATAAACCTGTTACGAAGCCTGCAGCTGAAGAAACTGAAGATAGAAAACAGGCCAAAGTTGTGGTTGAGGATAAAAAGAAAAAGCACGATCCACAACTGTCTGCCGTGCCTTCTAAGCCGAGTGAAGGGAACCTTCGGTCGCCAATTTGCTGCATCATGGGTCATGTGGACACTGGCAAAACCAAGCTTCTGGATTGCATTCGAGGTACCAATGTTCAAGAAGGTGAGGCTGGTGGTATCACCCAACAGATTGGTGCAACGTACTTTCCTGCTGAGAACATACGTGAAAGAACCAAGGAACTGAAAGCTGATGCAACACTGAAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGACACGAGTCATTCAATAACTTGAGGTCTCGGGGTTCAGGTCTATGTGATATTGCAATTTTGGTTGTGGACATTATGCATGGCTTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACTGAATTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGACGCAGCAGTCTAAGGATGTTCAAAATGAGTTCAATATGAGGGTCACTCAGATCGTTACTCAGTTCAAGGAGCAAGGGCTAAATACTGAATTGTATTACAAAAACAAAGAAATGGGCGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCGGATATGTTATTACTATTAGTTCAGTGGACCCAAAAGACCATGACCGAGAAGCTTACATACAGCGAAGAAGTGCAGTGTACCGTTTTGGAAGTCAAGGTTATTGAAGGCCATGGAACTACTATTGATGTTGTTTTAGTTAATGGTGTTCTTCATGAAGGGGATCAAATAGTTGTATCTGGAATGCAGGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATATATCCATCACAAAGAAATCAAAGCTGCTATGGGCATCAAGATCACTGCCCAGGGGCTTGAACATGCTATTGCTGGAGCTAGTTTATATGTGGTAAAGCCTGATGATGATTTGGAATATATTAAAAAAGCAGCTTTGGAAGACGTGGAGTCGGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTCCAGGCATCTACCCTTGGCTCATTGGAAGCATTATTGGAGTTTTTGAAAACTCCAGAAGTGAATATTCCTGTTAGTGCTATAAACATAGGCCCGGTACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATGCTACTATATTGGCATTTGATGTCAAAGTCACCCCTGAAGCTAGGGATCTTGCAGAAGAATTGGGTGTGAAGATTTTTATAGCCGATATCATTTATCATCTATTTGATCAATTTAAGGCTTACATGGACAACATTAAGGAGGAGAAAAAGAAAGAATCTGCGGATGAGGCAGTCTTCCCATGTGTTCTGAAGATCTTACCAAATTGTGTCTTCAACAAGAAGGATCCGATTGTTTTGGGAGTTGATATCCTTGAAGGCATTTTAAAGATTGGAACTCCAATTTGTATCCCTTCCCAAGAGTTCATTGATATTGGTCGCATTGCCTCCATTGAGAATAACCATAAACCGGTTGATTTTGCGAAGAAAGGGCAGAAAGTAGCCATTAAGATTGTTGGCAGCAATTCTGAAGAACAGCAGAAAATGTTCGGGAGGCATTTTGAGATTGATGATGAACTTGTAAGCCATATATCACGGAGATCTATTGATATTCTCAAAACTAATTATCGGGATGATCTGACTATGGAGGAATGGAAACTGGTGGTTAAATTGAAGACTTTGTTCAAGATACAATAA 4047 0.425 MGKKKPAIRDDENPPPQQGGGKSKKKAPVIDDDEYSIGVEVSEDAAPVAVEEKPVKKKGKKGNAKSKKDNDDDFDDDVVVDDDDVNEIVFAGKKKGKSKKSGGGSSGGSVFASGFGVLGDEEDVDNDDEEKSEVTGEGDDDEDEPVVSFTGKKKSSKGSKKGGGGGSVFTAAAGFGLLGDEEDVDNDDGEEKSDEDEPVVFLGKKKSSKGSKKGASSLFSALDENDDGEEESKNEKVEDDDDDDDEPITFSGKKKKSSKGSKKAGGSLSKAIPEEDSVSVSESAKGGDDDKDEDDVSFAFTGKKKSSKKKSGSAAAKMNDEIEFGSESVNVVEAEKPSVDNGNISKSEEVVGTSKNKKKNKKKSGRTKEEEDDLDKLLAELGEAPATAQPAAAPPQQDDKVQPVPVVGSAPGASGEKEGEDETVESAAAKKKKKKKEKEKEKKAAAAAAGSAPVVEAVEEKAEAIEPKKNDSKTKAADKKVPKHVREMQELLARRKEAEEKKKKEEEEKQRKEEEERRRIEELERQAEEAKRRKKEKEKEKLLKKKQEGKLLTGKQKEEARRLEAMRRQILNSTGGVTLPGADTGGPSKKPIYQTKKGKSTNRNHNGAAAVKTEENVEATETTADLDTEELEKVEEVESVQMEDKAELPEVVEEVVDEDDDVEDEWDAKSWDDVNLNDRGAFADEEVDSEPEPIVKKEIKNGIPSKNAGATNKPVTKPAAEETEDRKQAKVVVEDKKKKHDPQLSAVPSKPSEGNLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRERTKELKADATLKVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMTQQSKDVQNEFNMRVTQIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVQWTQKTMTEKLTYSEEVQCTVLEVKVIEGHGTTIDVVLVNGVLHEGDQIVVSGMQGPIVTTIRALLTPHPMKELRVKGSYIHHKEIKAAMGIKITAQGLEHAIAGASLYVVKPDDDLEYIKKAALEDVESVLSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSAINIGPVHKKDVMKASVMLEKKREYATILAFDVKVTPEARDLAEELGVKIFIADIIYHLFDQFKAYMDNIKEEKKKESADEAVFPCVLKILPNCVFNKKDPIVLGVDILEGILKIGTPICIPSQEFIDIGRIASIENNHKPVDFAKKGQKVAIKIVGSNSEEQQKMFGRHFEIDDELVSHISRRSIDILKTNYRDDLTMEEWKLVVKLKTLFKIQ 1348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 594 609 - -
Mepo4g04163 1348 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 756 972 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 Pfam Elongation factor Tu GTP binding domain 760 968 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 757 1047 IPR027417 -
Mepo4g04163 1348 FunFam Eukaryotic translation initiation factor 5B 750 978 - -
Mepo4g04163 1348 FunFam Eukaryotic translation initiation factor 5B 1098 1204 - -
Mepo4g04163 1348 FunFam eukaryotic translation initiation factor 5B 979 1098 - -
Mepo4g04163 1348 Gene3D - 751 978 IPR027417 -
Mepo4g04163 1348 FunFam Eukaryotic translation initiation factor 5B 1211 1348 - -
Mepo4g04163 1348 Gene3D Translation factors 1211 1348 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 703 752 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 1 649 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 620 637 - -
Mepo4g04163 1348 CDD aeIF5B_II 980 1086 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 718 744 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 459 566 - -
Mepo4g04163 1348 Coils Coil 481 548 - -
Mepo4g04163 1348 Coils Coil 424 449 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 120 144 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 415 432 - -
Mepo4g04163 1348 CDD IF2_eIF5B 759 969 - -
Mepo4g04163 1348 PRINTS GTP-binding elongation factor signature 876 885 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 PRINTS GTP-binding elongation factor signature 824 834 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 PRINTS GTP-binding elongation factor signature 840 851 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 PRINTS GTP-binding elongation factor signature 760 773 IPR000795 GO:0003924|GO:0005525
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 46 73 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 180 195 - -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 281 302 - -
Mepo4g04163 1348 Gene3D Translation factors 979 1099 - -
Mepo4g04163 1348 Pfam Translation-initiation factor 2 1086 1197 IPR023115 -
Mepo4g04163 1348 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1081 1210 IPR036925 -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 223 246 - -
Mepo4g04163 1348 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 359 1344 IPR015760 -
Mepo4g04163 1348 NCBIfam small GTP-binding protein domain 761 885 IPR005225 GO:0005525
Mepo4g04163 1348 Pfam Elongation factor Tu domain 2 995 1073 IPR004161 GO:0005525
Mepo4g04163 1348 CDD IF2_aeIF5B_IV 1219 1314 - -
Mepo4g04163 1348 SUPERFAMILY Translation proteins 1215 1347 IPR009000 -
Mepo4g04163 1348 Gene3D - 1100 1204 IPR036925 -
Mepo4g04163 1348 MobiDBLite consensus disorder prediction 364 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04163 Mepo-Chr4 51505188 51513602 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04163 247 1348 Eukaryotic Initiation Factors Gene Family AT1G76810 67.372 0.0 1202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04163 K03243 - gmx:100814640 1537.32