Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04162 ATGATGGTGAATAAGAATCCATCAATACGTGAAGAAGAGAATTCCAAGAACAAGGATCCGGTTATCAACGACGACGGATATTCTATCAAAACTCAGGCGGCTCTTATGGCTTTGGAAGAGAAACCCGAGACCGAGACTGTGGAATCAGCTGCGGCAAAAAAGAAAAGAAAGAAGAAGGAGAAGGAAAAGGAGAAGAAAGCAGCTGCTGCAGCCGCCGGAAGTACATCAGTAATTGAAACTGCCGAGACAAACTATGCCAACACTCTGTATTTCTCCATAGCAGCAGCTAAAAATCAAATTGTTTCGAAGCCTGTGGCTGAAGAAACTGAAGATAGAGAAGATGAGGAGAAAAAAGAAGAACACTATCCACAACAGGCTGCTGTGCCTTCTAGGCTGAGTGATAGTAACCTCCGGTCACCAATTTGCTGCATCATGGGTCATGTGGACGCTGGCAAGACCAAACTTCTAGATTGTATTCGAGGTTTAAATGTTCAAGAAGGTGAGGCTGGCGGTATCACTCAACAAATTGGTGCAACTTACTTTCCTGCCGAGAACATACGTGATAGAACTAAGGAACTGAAAGCTGATGCAACGCTGGAAGTTCCCGGTCTACTGGTTATTGATACCCCAGGCCACGAATCATTCAATAACTTAAGGTCTCGGGGTTCTGGTCTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGATTAGAGCCACAAACTATAGAGTCACTCAATCTATTAAAAATGAGGAACACAGAGTTCATTGTTGCATTGAATAAGGTTGACAGGCTTTATGGCTGGAAAACATGTCGCAATGCTCCAATTCGTAAAGCAATGAAGCAGCAGTTTGAAGATGTCAAAAATATGTTTAAAACAAGGGTCACTGAGATTGTTACTCAGTTCAAGGAACAGGGGCTAAATACTGAGTTGTATTATAAAAATAAAGAAATGGGAGAAACATTCAGCATTGTGCCTACAAGTGCAATAAGTGGTGAAGGAATCCCAGATATGTTATTACTATTAGTTAAGTGGACTCAAAAGACCATGACCAAGAAGCTTACATACAGCGAAGAAGGTCCAATTGTTACCACAATTCGAGCTTTATTGACACTTCATCCAATGAAGGAACTTCGTGTTAAGGGATCATACATCCATCACAAAGAAATCAAAGCTGCAATGGGTATCAAGATCGCTGCCCAGGGACTTGAACATGCTGTTGCTGGCGCTAGTTTATACGTGGTGAAGCCTAATGATGATTTGGAATATCTTAAAAAAGGAGCCTTGGAAGATGTGGAGTCAGTCTTGAGCAGGATTGACAGGAGTGGTGAGGGCGTTTGTGTCCAGGCATCTACACTTGGCTCATTGGAATCATTATTAGAGTTTTTGAAAACACCAGAAGTGAATATTCCTGTTGGTGCTATAAACATAGGCCCTGTACATAAGAAGGATGTGATGAAGGCCAGTGTAATGCTTGAAAAGAAACGAGAGTATTCTACTATATTGGCGTTTGATGTCAAAGTCACCTCTGAAGCTAAGGAACTTGCAGATAAATTGGGTGTGAAAATTTTTATTGCCGATATTATTTATCATCTATTTGATCAATTTAAGGTTTACATGGCCAACATTAAGGAGGAGAAAAAGAAAGAATCTGCCGATGAGGCAGTCTTTCCATGCGTTCTGAAGATCATACCAAATTGTGTCTTCAACAAGAAGGATCCGATTATTTTGGGAGTTGATATCCTTAAAGGCATTTTAAAGATTGGAACTCCGGTTTGTATTCCTACCCAAAATTTCATTGATATTGGTCGTATCAGCTCCATTAAGATTAACAATAAACTGGTTGATAGTGCGACAAAAGGGCAGCAAGTAGCCATTAAGATTGTAGGCGGAAATTCTGAGGAACAACAGAAAATGTTTGGGAGACATTTTGGGATTCATGATGAACTTGTAAGCCATATTTCACAGAGATCTATTGATGTTCTCAAAACTTATTATCGAGATGATCTATCGATGGAGGAACGTAAGTTGCTGGTGAACTTGAATAGGATTTTCAAGATACAATGA 2073 0.4023 MMVNKNPSIREEENSKNKDPVINDDGYSIKTQAALMALEEKPETETVESAAAKKKRKKKEKEKEKKAAAAAAGSTSVIETAETNYANTLYFSIAAAKNQIVSKPVAEETEDREDEEKKEEHYPQQAAVPSRLSDSNLRSPICCIMGHVDAGKTKLLDCIRGLNVQEGEAGGITQQIGATYFPAENIRDRTKELKADATLEVPGLLVIDTPGHESFNNLRSRGSGLCDIAILVVDIMHGLEPQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNAPIRKAMKQQFEDVKNMFKTRVTEIVTQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDMLLLLVKWTQKTMTKKLTYSEEGPIVTTIRALLTLHPMKELRVKGSYIHHKEIKAAMGIKIAAQGLEHAVAGASLYVVKPNDDLEYLKKGALEDVESVLSRIDRSGEGVCVQASTLGSLESLLEFLKTPEVNIPVGAINIGPVHKKDVMKASVMLEKKREYSTILAFDVKVTSEAKELADKLGVKIFIADIIYHLFDQFKVYMANIKEEKKKESADEAVFPCVLKIIPNCVFNKKDPIILGVDILKGILKIGTPVCIPTQNFIDIGRISSIKINNKLVDSATKGQQVAIKIVGGNSEEQQKMFGRHFGIHDELVSHISQRSIDVLKTYYRDDLSMEERKLLVNLNRIFKIQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04162 690 Coils Coil 44 71 - -
Mepo4g04162 690 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 11 360 IPR015760 -
Mepo4g04162 690 CDD IF2_eIF5B 140 350 - -
Mepo4g04162 690 MobiDBLite consensus disorder prediction 41 55 - -
Mepo4g04162 690 Pfam Elongation factor Tu GTP binding domain 141 348 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 FunFam Eukaryotic translation initiation factor 5B 131 359 - -
Mepo4g04162 690 Gene3D Translation factors 553 690 - -
Mepo4g04162 690 CDD IF2_aeIF5B_IV 561 656 - -
Mepo4g04162 690 MobiDBLite consensus disorder prediction 104 124 - -
Mepo4g04162 690 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 424 552 IPR036925 -
Mepo4g04162 690 FunFam Eukaryotic translation initiation factor 5B 440 546 - -
Mepo4g04162 690 NCBIfam small GTP-binding protein domain 142 266 IPR005225 GO:0005525
Mepo4g04162 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 133 389 IPR027417 -
Mepo4g04162 690 Pfam Translation-initiation factor 2 430 539 IPR023115 -
Mepo4g04162 690 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 137 353 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 MobiDBLite consensus disorder prediction 1 75 - -
Mepo4g04162 690 MobiDBLite consensus disorder prediction 104 131 - -
Mepo4g04162 690 Gene3D - 131 355 IPR027417 -
Mepo4g04162 690 PRINTS GTP-binding elongation factor signature 141 154 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 PRINTS GTP-binding elongation factor signature 257 266 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 PRINTS GTP-binding elongation factor signature 205 215 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 PRINTS GTP-binding elongation factor signature 221 232 IPR000795 GO:0003924|GO:0005525
Mepo4g04162 690 Gene3D Translation factors 356 439 - -
Mepo4g04162 690 Gene3D - 440 546 IPR036925 -
Mepo4g04162 690 FunFam Eukaryotic translation initiation factor 5B 553 690 - -
Mepo4g04162 690 SUPERFAMILY Translation proteins 557 689 IPR009000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04162 Mepo-Chr4 51454889 51459472 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04162 134 690 Eukaryotic Initiation Factors Gene Family AT1G76810 73.993 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04162 K03243 - gmx:100814640 932.554