Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04161 ATGTTCCATCATCAAACCAACATCATTATTCTCCTCCGAACCACTTCAACCTCCTCAAAAAGACACTATTGTCTATGGTCAAGTAAAAAAGACCCAGACATAGAATCAGCACTCTCACGCAACAAACGTTGGATAATTAACAACCAAATCAAAAACATTATCCTCCGTTACCCTAACAACCAAATCCCAATCCAAACCCTTCAGAAGAAATTCAAAACCCTAGATCTTCAAGGTAAAGCCCTTAATTGGATTTCCAAATACCCTTCTTGCTTCCAGTTTCATCAAGATCACATTCTTCTTACTAAACGCATGATGGAGCTTGTTCATGAAGAACAATCCTTGAAAGATTCTCTTGAAGCTGTTTTCGTTCGACGTCTCGCCAAATTGCTCATGCTTTCTTTGAATAATTGTTTGAATGTTATGAAGATCAATGAAATTAAGAATAGTTTAGGGTTTCCTGATGATTATTTGATTGGGATTGTGGCGAAATATTCCGATTTGTTTCGAATTAGGAATGAGAGTGGGAGGAGAAGTTCTATGGTGGTTGAGTTGATGAAATGGAACCCTGATTTTGCTGTTTCTGAAGTTGAGGCTTTGGCGATGAAGAACGGTGTTGAGGTGAATTTTTCGTGTTGTTTGCCTTCTAGTTGGGTGAAATCGTTGGAGAAATTTCGCGAATTTGAGTTGGTTCCTTATGTTTCGCCTTATTCTGATCCGAGGGGGTTGGTGGAAGGGTCTAAGGAAATGGAAAAGAGGAATGTGGGTTTGGTTCATGAGTTGTTGTCATTGACTCTTTGGAAGAAGATTTCAATTATGAAATTGGGTCATTTTAAAAGGGAGTTTTTTTTGCCTGATAAGGTGAATGTTTTGTTGCTTAAGCATCCTGGGATTTTCTATGTTTCTAATAAGTATAGGATTTATACTGTTTTACTTAGAGAAGGGTATGTAGGGTCTCAATTAGTTGATAAGGATCCTCTTGTGGTTGTTAAAGAGAAATTTGGGGAGATTATGCAGGAAGGGCTTCATGAGTATAACCAGAGGCGGCGACTTGTTAATATCGAAAAGAAGAGAAATAAAGGTCTTCCTTTGAATAGGGTGGATGAGGATCACATGAAGGGTAGAAGAAGGAGAAGAAACAGGGTAGTGTCTGATGAAGATGATGAGATTGAGGGAGAAAATGTTTTAGAGATTAAGGGGCAGATTAGTTTGAGCAGTTCAAAATATTTTGAAGTTTTCCTATGTTATGCTTTAGGCCAGGATAGTATTTATCAGAGGCAATTGAGAGAGTTTAAATTCTCACAGTTGATTGAAGCAACCAATGGCTTCTCAGCAGAAAGCCTCATTGGTTGTGGTGGTTTTGGTGAAGTGTTGAAGGCCACACTCAAAGACGGAACATGTGTCGCGATAAAGAAGCTCATTCGACTGAGTTGCAAAGGCGATAGAGAATTCATGGCTGATATGGAAACCTTGGGAAAAATCAAGCATAAAAACCTTGTCCCTTTATTGGGATACTGCAAAGTAGGAGAAGAGAGGCTACTTGTTTATGAATACATGGAATATGGAAGCCTAGAAGAGATGCTCCACGGAAGAATAAAGACACATGATCGACGAATTTTAACATGGGAAGAAAGGAAGAAGATTGCAAGAGGAGTCTCAGATTTCGGAATGGCAAGACTAATAAGTGCACTTGATACACATCTCAGTGTAAGCACACTAGCAGGAACACCTGGATATGTTCCACCAGAGTATTACCAAAGTTTCAGGTGCACTGCAAAGGGTGATGCTTATTCATTTGGTGTTGTAATGTTGGAACTTCTTAGTGGGAAAAGGCCTACTGATAAGGAGGATTTCAGTGACAAACTTGGTTGGATGGGCTAA 1878 0.393 MFHHQTNIIILLRTTSTSSKRHYCLWSSKKDPDIESALSRNKRWIINNQIKNIILRYPNNQIPIQTLQKKFKTLDLQGKALNWISKYPSCFQFHQDHILLTKRMMELVHEEQSLKDSLEAVFVRRLAKLLMLSLNNCLNVMKINEIKNSLGFPDDYLIGIVAKYSDLFRIRNESGRRSSMVVELMKWNPDFAVSEVEALAMKNGVEVNFSCCLPSSWVKSLEKFREFELVPYVSPYSDPRGLVEGSKEMEKRNVGLVHELLSLTLWKKISIMKLGHFKREFFLPDKVNVLLLKHPGIFYVSNKYRIYTVLLREGYVGSQLVDKDPLVVVKEKFGEIMQEGLHEYNQRRRLVNIEKKRNKGLPLNRVDEDHMKGRRRRRNRVVSDEDDEIEGENVLEIKGQISLSSSKYFEVFLCYALGQDSIYQRQLREFKFSQLIEATNGFSAESLIGCGGFGEVLKATLKDGTCVAIKKLIRLSCKGDREFMADMETLGKIKHKNLVPLLGYCKVGEERLLVYEYMEYGSLEEMLHGRIKTHDRRILTWEERKKIARGVSDFGMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDAYSFGVVMLELLSGKRPTDKEDFSDKLGWMG 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04161 625 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 18 367 IPR045040 GO:0003723
Mepo4g04161 625 ProSiteProfiles Protein kinase domain profile. 442 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04161 625 Pfam Protein tyrosine and serine/threonine kinase 445 535 IPR001245 GO:0004672|GO:0006468
Mepo4g04161 625 ProSitePatterns Protein kinases ATP-binding region signature. 448 471 IPR017441 GO:0005524
Mepo4g04161 625 Gene3D Transferase(Phosphotransferase) domain 1 550 624 - -
Mepo4g04161 625 Pfam Protein kinase domain 551 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04161 625 Gene3D Phosphorylase Kinase; domain 1 410 517 - -
Mepo4g04161 625 Pfam Plant organelle RNA recognition domain 29 340 IPR021099 GO:0003723
Mepo4g04161 625 FunFam serine/threonine-protein kinase BRI1-like 2 417 517 - -
Mepo4g04161 625 SUPERFAMILY Protein kinase-like (PK-like) 416 620 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04161 Mepo-Chr4 51444134 51449577 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04161 421 623 Receptor kinase-like Gene Family AT1G55610 59.336 5.22e-86 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo4g04161 PORR 4.6e-96 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04161 - - mtr:11445827 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04161 4 51444134 51449577 Mepo4g04161 4 51444134 51449577 ECH