Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04158 ATGCTAGGTGACTCAGCTGTTTTGAGTGGTGGCGGTGGAGATGCACCAGCAGCAGCTGCACCACCTAACATGACGGTGGAAGGTGGTGGTGGTGGAGTTGGATCAAATTCAGAGAGTGATGTTGAAAGAGGAAGAGTTGAAGATGGTGAACGTAGCTTCGGCGGTAACCGGTGGCCGCGACAAGAAACTTTGGCGCTTTTAAGGATACGATCGGATATGGATACAGTATTTCGAGATGCAAGTGTTAAAGGTCCTTTGTGGGATGAAGTTTCAAGGAAGCTAGCAGAACTTGGGTACCACAGAAGTTCAAAGAAATGCAAAGAGAAATTTGAGAATGTTTATAAGTATCACAAGAGAACCAAAGATGGTCGAGGTGGAAAATCAGATGGTAAAACTTATCGATTTTTTGATCAATTAGAAGCCCTTGATCATTTTCATACCAACCCTTCAACTCATCAACAATATCAACCTCAAAACATATCAAAACCACCACAAATTTCGGCACCAACACCGTCACAAGTTGTTACAACTGCAACAGTTTCACTACCAATAACAGAAGCAACAATGTCACAAGTTGTTAACACCACTCTAAGTATCCCTCATGCAACTGTTCCATCAATTTCCATGCCTCAAAACAATATTGCAACTACCCAACCAATTATGAATATGAATCCTACTACAATCCCTTCCAATCCTTCAACTATTTTCCAACCATCAACAACAAACCCTACTTCCACCAACCCTCTTCCATCTTTTCCCAACATTTCTACAGATCTATTATCCAATTCCATGGCTAGCTCCTACTCGACGTCTTCTGAAGACACAACCGAAGAAGGATCTCGAAAGAGGAAGCGAAAATGGAAGGACTTTTTCGAGAGAATAATGAAAAAAGTGACCGAAAAGCAAGAGGATTTGCAGAAGAGATTCTTGGAGGTCATTGAGAAACGCGAGCAAGAACGAGTTGTTAGAGAAGAAGCGTGGAGAGCAAAAGAGATGCAAAGAATTAATAGAGAGAGGGAAATGCTTGCACAAGAAAGATCTATAACTGCAGCAAAAGATGCTGCAGTCATGTCTGTCTTGCAAAAAATCGCCGAACAACAAAATCTAGGACAAGCATTGCATAATATCAACATTGCACAACCACCGCCACCACAGCAAACACCAACACAACAACCACCACAGAGAAGTGTAGCACCAACACCAACACCGGCGGTAGCACCAATATCAGTGGTACAAGTTAACACAACGCCGCCAGCACAACCACCTCCGGCTACCAAGTTAGGCCCAACAATAGTCCCGCAGCAACAGCAACAGCAACAACAGTTGGTGACGAATATGGAAATTGTGAAAGTTGATAACAATGGTGAGACTTTCATGGGAGGGATGAGTTCGTCAAGATGGCCGAAAGTTGAAGTTCAAGCACTGATAAATCTGAGGACGAGCATGGACAATAAGTACCAAGAGAATGGACCAAAAGGTCCTCTATGGGAGGAGATATCTTTAGCAATGAAGAACCTCGGTTACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAATATAAACAAGTACTTCAAGAAAGTGAAAGAAAGTAACAAAAAGAGACCAGAAGATTCAAAGACATGTCCTTATTTTCATCAGTTGGATGCTTTGTATAAGGAGAAAGGAAAGGGGGACAATTCTAGCGGCGGTGCTGGTTCGAACCAGGCGGTGCAGGTGGAGAACATGGCGGCGCCGTTAATGGTTCAGCCGGAGCAGCAATGGCGGCCACCTCAGCAGGGAGAAGATAACATGGAGCAGAACCGTGGACAGGAAGAAGAAGATATGGATGAAGATGATAAAGATGGTGAGGAAGAAGATGATGAAGAAGATATGGATGAAAGTGGTGGTGGTGGTAACTTTGAGGTAGTGGCAAACAAGCCTGCAGTGGGTGCATCAGCTTGA 1947 0.4361 MLGDSAVLSGGGGDAPAAAAPPNMTVEGGGGGVGSNSESDVERGRVEDGERSFGGNRWPRQETLALLRIRSDMDTVFRDASVKGPLWDEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKDGRGGKSDGKTYRFFDQLEALDHFHTNPSTHQQYQPQNISKPPQISAPTPSQVVTTATVSLPITEATMSQVVNTTLSIPHATVPSISMPQNNIATTQPIMNMNPTTIPSNPSTIFQPSTTNPTSTNPLPSFPNISTDLLSNSMASSYSTSSEDTTEEGSRKRKRKWKDFFERIMKKVTEKQEDLQKRFLEVIEKREQERVVREEAWRAKEMQRINREREMLAQERSITAAKDAAVMSVLQKIAEQQNLGQALHNINIAQPPPPQQTPTQQPPQRSVAPTPTPAVAPISVVQVNTTPPAQPPPATKLGPTIVPQQQQQQQQLVTNMEIVKVDNNGETFMGGMSSSRWPKVEVQALINLRTSMDNKYQENGPKGPLWEEISLAMKNLGYNRNAKRCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLDALYKEKGKGDNSSGGAGSNQAVQVENMAAPLMVQPEQQWRPPQQGEDNMEQNRGQEEEDMDEDDKDGEEEDDEEDMDESGGGGNFEVVANKPAVGASA 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04158 648 CDD GT1 56 121 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 229 274 - -
Mepo4g04158 648 Pfam Myb/SANT-like DNA-binding domain 56 142 IPR044822 -
Mepo4g04158 648 Pfam Myb/SANT-like DNA-binding domain 465 552 IPR044822 -
Mepo4g04158 648 FunFam Trihelix transcription factor GT-2 467 528 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 40 55 - -
Mepo4g04158 648 PANTHER FI21293P1 27 609 - -
Mepo4g04158 648 ProSiteProfiles Myb-like domain profile. 56 114 IPR001005 -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 376 402 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 602 630 - -
Mepo4g04158 648 Coils Coil 288 308 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 229 285 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 381 400 - -
Mepo4g04158 648 ProSiteProfiles Myb-like domain profile. 459 523 IPR001005 -
Mepo4g04158 648 Gene3D - 467 528 - -
Mepo4g04158 648 Gene3D - 58 119 - -
Mepo4g04158 648 SMART sant 463 525 IPR001005 -
Mepo4g04158 648 SMART sant 54 116 IPR001005 -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 148 170 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 582 648 - -
Mepo4g04158 648 FunFam Trihelix transcription factor GT-2 58 119 - -
Mepo4g04158 648 CDD GT1 465 530 - -
Mepo4g04158 648 MobiDBLite consensus disorder prediction 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04158 Mepo-Chr4 51398799 51402440 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04158 54 600 Trihelix Transcription Factor Family AT1G76890 45.714 5.67e-143 426
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g04158 Myb_DNA-bind_4 7.5e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04158 - - psat:127090944 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g04082 5 51810474 51814098 Mepo4g04158 4 51398799 51402440 PCT