Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04157 ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTGCCGGTTACGGCGCAAAACGGTGGCGGCGGTGAAGAGAAAGGAAGAGAGATTGGTGGTGAGGAAGATGATAAGATGAACATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGAACTTGGCTATCATAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGAAGTGGGAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCTCTTACCATCCAAAACCACAACCAAATAATAACACACTCTCATCACCAACAACAAATCCCAATGAAACCACACAAACAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCATTTCTCCTTCACAACAACCTAACAACAACAATGTTCCAAATTCTTTGCCAAACATGAACAACCTATTCTCAAACACAACAACCTCGACTTCTTCTTCCACGGCTTCGGACGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAGGCTATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAACCACCACCACAACCACCGCCAGCACCAGAGCTGTCTTCGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAACAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATATGAATAATGGTTACAAAAGTGGTAATGGTGGTGCTTCTCCTTCGCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCGCCATTGTGGGAAGATATTTCAGCTGCCATGAAGAGACAAGGATACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAAAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGTCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAAGCCAAATGAGACGATGGAGCCATTAATGGTGCAGCCAGAACAGCAATGGAGACCTCCAACTACATTTGAAGAGGGTACTGTGGTGAAGAATGTTAATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGAAGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAGGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAGTTGTATGA 1704 0.392 MQLGDATVMMETCSGENIVPVTAQNGGGGEEKGREIGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSSYHPKPQPNNNTLSSPTTNPNETTQTISYVTTTVPSTNPTTFISPSQQPNNNNVPNSLPNMNNLFSNTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMDRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSSCQTALASQVQTQQLVIPNNNIVEFQNMNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMKPNETMEPLMVQPEQQWRPPTTFEEGTVVKNVNEAKEEDDNGDVDDEEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTVV 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04157 567 CDD GT1 374 439 - -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 507 567 - -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 518 543 - -
Mepo4g04157 567 CDD GT1 55 119 - -
Mepo4g04157 567 Gene3D - 376 437 - -
Mepo4g04157 567 Gene3D - 56 117 - -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 147 231 - -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 551 567 - -
Mepo4g04157 567 FunFam Trihelix transcription factor GT-2 376 437 - -
Mepo4g04157 567 ProSiteProfiles Myb-like domain profile. 54 112 IPR001005 -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 147 224 - -
Mepo4g04157 567 SMART sant 52 114 IPR001005 -
Mepo4g04157 567 SMART sant 372 434 IPR001005 -
Mepo4g04157 567 Pfam Myb/SANT-like DNA-binding domain 374 461 IPR044822 -
Mepo4g04157 567 Pfam Myb/SANT-like DNA-binding domain 54 140 IPR044822 -
Mepo4g04157 567 FunFam Trihelix transcription factor GT-2 56 117 - -
Mepo4g04157 567 PANTHER FI21293P1 32 521 - -
Mepo4g04157 567 ProSiteProfiles Myb-like domain profile. 368 432 IPR001005 -
Mepo4g04157 567 MobiDBLite consensus disorder prediction 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04157 Mepo-Chr4 51376674 51380190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04157 50 496 Trihelix Transcription Factor Family AT1G76890 49.194 4.52e-142 421
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g04157 Myb_DNA-bind_4 2.6e-22 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04157 - - gsj:114370603 635.18