LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g04157	ATGCAGCTTGGTGATGCAACAGTAATGATGGAGACTTGCTCCGGTGAGAATATTGTGCCGGTTACGGCGCAAAACGGTGGCGGCGGTGAAGAGAAAGGAAGAGAGATTGGTGGTGAGGAAGATGATAAGATGAACATCAATATTAACGGTGGTGGAGGAAATAGGTGGCCCCGCCAAGAAACATTGGCTCTCTTGAAGATAAGATCAGATATGGATGGTGTTTTTCGTGATTCAAGTCTTAAGGGTCCACTTTGGGAAGAGGTTTCAAGGAAACTAGCTGAACTTGGCTATCATAGAAGCTCAAAGAAGTGCAAGGAGAAATTTGAAAATGTATACAAGTATCACAAAAGAACCAAAGAAGGTAGAAGTGGGAAATCAGAAGGAAAAACCTATAGATTTTTTGATCAATTACAAGCACTTGAAAAACAACTCACATTCTCCTCTTACCATCCAAAACCACAACCAAATAATAACACACTCTCATCACCAACAACAAATCCCAATGAAACCACACAAACAATATCATATGTCACAACCACTGTTCCATCCACAAACCCTACCACATTCATTTCTCCTTCACAACAACCTAACAACAACAATGTTCCAAATTCTTTGCCAAACATGAACAACCTATTCTCAAACACAACAACCTCGACTTCTTCTTCCACGGCTTCGGACGAAGACTTGGAAGAGAAGTATAGAAAGAAGAGAAAATGGAAGGACTATTTCAGGAGACTCACAAGACAAGTGCTTGCAAAACAAGAGGAAATGCAAAAGAAGTTTCTTGAGGCTATAGACAAACGTGAAAAAGAACACATTGCTCAACAAGATGCTTTGAGAATTCAAGAAATGGATAGAATCAATAAAGAACACGAACTTCTTATCCAAGAAAGATCATCAGCAGCTCAAAAAAATGCAGCTGTTATTGCATTTCTCCAAAAATTGTCTGGACAACCACCACCACAACCACCGCCAGCACCAGAGCTGTCTTCGTGTCAGACAGCTCTGGCATCACAAGTTCAAACACAACAACTAGTGATACCAAACAACAACATTGTTGAATTTCAAAATATGAATAATGGTTACAAAAGTGGTAATGGTGGTGCTTCTCCTTCGCCATCAAGGTGGCCAAAAAGTGAAGTTCATGCTCTAATAAGGATAAGAACAAGTCTTGAACCAAAGTATCAAGAAAATGGGCCAAAAGCGCCATTGTGGGAAGATATTTCAGCTGCCATGAAGAGACAAGGATACAATAGGAATGCAAAAAGGTGCAAAGAAAAATGGGAGAATATCAACAAATACTACAAAAAAATGAAGGAAAGTAACAAGCAAAGGCGTGATGATAGTAAGACATGTCCTTATTTTAATGAACTTGAAGCTATTTACAAAGAAAAGAACAAAACACAGAACCTTTTTGGTTCTAATTCGTTTCATAGCATGAAGCCAAATGAGACGATGGAGCCATTAATGGTGCAGCCAGAACAGCAATGGAGACCTCCAACTACATTTGAAGAGGGTACTGTGGTGAAGAATGTTAATGAAGCAAAAGAAGAAGATGACAATGGTGATGTTGATGATGAAGAAGATGAAAACATGGATGAATATGAAGATGGAGATAGCATGGAAGAAGATGAGGGAGGTGTTAGTAGCCGTTATGAAGTTGTGACAACAAATAAACTTTCATCAATGGACACAGTTGTATGA	1704	0.392	MQLGDATVMMETCSGENIVPVTAQNGGGGEEKGREIGGEEDDKMNININGGGGNRWPRQETLALLKIRSDMDGVFRDSSLKGPLWEEVSRKLAELGYHRSSKKCKEKFENVYKYHKRTKEGRSGKSEGKTYRFFDQLQALEKQLTFSSYHPKPQPNNNTLSSPTTNPNETTQTISYVTTTVPSTNPTTFISPSQQPNNNNVPNSLPNMNNLFSNTTTSTSSSTASDEDLEEKYRKKRKWKDYFRRLTRQVLAKQEEMQKKFLEAIDKREKEHIAQQDALRIQEMDRINKEHELLIQERSSAAQKNAAVIAFLQKLSGQPPPQPPPAPELSSCQTALASQVQTQQLVIPNNNIVEFQNMNNGYKSGNGGASPSPSRWPKSEVHALIRIRTSLEPKYQENGPKAPLWEDISAAMKRQGYNRNAKRCKEKWENINKYYKKMKESNKQRRDDSKTCPYFNELEAIYKEKNKTQNLFGSNSFHSMKPNETMEPLMVQPEQQWRPPTTFEEGTVVKNVNEAKEEDDNGDVDDEEDENMDEYEDGDSMEEDEGGVSSRYEVVTTNKLSSMDTVV	567

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g04157	567	CDD	GT1	374	439	-	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	507	567	-	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	518	543	-	-
	Mepo4g04157	567	CDD	GT1	55	119	-	-
	Mepo4g04157	567	Gene3D	-	376	437	-	-
	Mepo4g04157	567	Gene3D	-	56	117	-	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	147	231	-	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	551	567	-	-
	Mepo4g04157	567	FunFam	Trihelix transcription factor GT-2	376	437	-	-
	Mepo4g04157	567	ProSiteProfiles	Myb-like domain profile.	54	112	IPR001005	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	147	224	-	-
	Mepo4g04157	567	SMART	sant	52	114	IPR001005	-
	Mepo4g04157	567	SMART	sant	372	434	IPR001005	-
	Mepo4g04157	567	Pfam	Myb/SANT-like DNA-binding domain	374	461	IPR044822	-
	Mepo4g04157	567	Pfam	Myb/SANT-like DNA-binding domain	54	140	IPR044822	-
	Mepo4g04157	567	FunFam	Trihelix transcription factor GT-2	56	117	-	-
	Mepo4g04157	567	PANTHER	FI21293P1	32	521	-	-
	Mepo4g04157	567	ProSiteProfiles	Myb-like domain profile.	368	432	IPR001005	-
	Mepo4g04157	567	MobiDBLite	consensus disorder prediction	19	42	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g04157	Mepo-Chr4	51376674	51380190	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g04157	50	496	Trihelix Transcription Factor Family	AT1G76890	49.194	4.52e-142	421

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	Trihelix	Mepo4g04157		Myb_DNA-bind_4	2.6e-22	CL0123