Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04133 ATGGATCCTCATGCTGCTGAAGATTTGCCTCAATACATTCATATCAATCAAAATGATTTTTTTATGCGAAGGCATAAGAAGCAGAAGGAGGAGGATATTGCTATATGTGAATGTAGGTATGATGAAGATGATCCTGACAGTGCCTGTGGAGATGGGTGTCTAAATGTATTAACCAGCACTGAATGCACCCCTGGATTTTGCCCTTGTGGCATCCTTTGTAAAAATCAGAAATTTCAGAAGTGTGAATATGCAAAAACAAAGTTATTTAAAACCGAAGGCCGAGGGTGGGGTCTTTTGGCTGATGAGGAAATTAAGGCAGGACAGTTTGTCATTGAATACTGTGGAGAAGTAATATCATGCAAAGAAGCCAAGCGCAGATCCCATACTTATGAAACTCAAGGTCTTAAGGATGCATTTATCATTTCTCTTAATGCGTCTGAATCTATCGATGCAACTAGAAAAGGAAGCCTTGCAAGATTTATAAACCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCATGGGGGAAATAAGAGTTGGAATATTTGCACTGGAAGATATTCCTATTGGAACTGAACTGGCATATGACTATAATTTTGAATGGTTTGGAGGTGCAAAGGTTCGCTGCCTCTGTGGTGCGCTCAAATGTTCTGAATTCCTTGGAGCAAAATCTCGTGGTTTTCAAGAGGATACTTATCTATGGGAAGATGATGATGACAGATACTCAATTGAGAAAATTCCTTTATATGACTCTGCGGAGGATGAACTCATGTCAAATGTTGGTGGACAGAGTGAACAATCCATGGCTATTATACTGAAAGCTGAAGAACCATCGGAGTCCACTGTTTTAAATATTCAACCACTGAATTCAATTGGGATCAATGGCTTAGGTATTCAGAAAATGAAAACTGAAATAGAAAGCGAGGACATGAGGTTGTACTCCCAAGATACCAAACAGGATCTTCCCCAAAAAAATGCAATGATATCGCGCATTCGAAGTAACACGGCAGGAGGAAAGTCCATCTCTACCAAAAGATCAAAGGGGGGAAAGCTTAAAAATCGCATACAGAAGAAAATTGATGCAAAGTATGCAGCTGGCCTTTTAGCATCAAAGGAAGCACAGGAGGAGATTTTAGATTATGAGAAAAGAAAAGATGACGCTACAGAAGCCCTTGATTCTTTATACAATGAAATACGGCCTGCCATTGAAGAACACGAGAAGGATACCCAAGACAGTGTATCTACGACAGTAGCAGAGAAGTGGATACAGGCTTCCTGCCTAAAACTCAAGGCGGAGTTTGATCTTTACTCGTCAATTATTAAAAATGTTGCTTGTACTCCTCAAAGGGCACCCAGCCAAGCAAAAGGTATTGAAGTTGATAACGAAGACAAAATGAAGCTTTTGACGTTCTCGCCCTCACCTAATCCGTAA 1440 0.4014 MDPHAAEDLPQYIHINQNDFFMRRHKKQKEEDIAICECRYDEDDPDSACGDGCLNVLTSTECTPGFCPCGILCKNQKFQKCEYAKTKLFKTEGRGWGLLADEEIKAGQFVIEYCGEVISCKEAKRRSHTYETQGLKDAFIISLNASESIDATRKGSLARFINHSCQPNCETRKWNVMGEIRVGIFALEDIPIGTELAYDYNFEWFGGAKVRCLCGALKCSEFLGAKSRGFQEDTYLWEDDDDRYSIEKIPLYDSAEDELMSNVGGQSEQSMAIILKAEEPSESTVLNIQPLNSIGINGLGIQKMKTEIESEDMRLYSQDTKQDLPQKNAMISRIRSNTAGGKSISTKRSKGGKLKNRIQKKIDAKYAAGLLASKEAQEEILDYEKRKDDATEALDSLYNEIRPAIEEHEKDTQDSVSTTVAEKWIQASCLKLKAEFDLYSSIIKNVACTPQRAPSQAKGIEVDNEDKMKLLTFSPSPNP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04133 479 SMART set_7 84 207 IPR001214 GO:0005515
Mepo4g04133 479 Pfam SET domain 95 201 IPR001214 GO:0005515
Mepo4g04133 479 Gene3D SET domain 2 236 IPR046341 -
Mepo4g04133 479 Coils Coil 373 400 - -
Mepo4g04133 479 ProSiteProfiles Post-SET domain profile. 208 224 IPR003616 -
Mepo4g04133 479 PANTHER SET DOMAIN PROTEINS 9 455 - -
Mepo4g04133 479 Pfam AWS domain 43 81 IPR006560 GO:0005634|GO:0042054
Mepo4g04133 479 FunFam Histone-lysine N-methyltransferase 1 236 - -
Mepo4g04133 479 ProSiteProfiles SET domain profile. 84 201 IPR001214 GO:0005515
Mepo4g04133 479 SMART shorttest3 31 83 IPR006560 GO:0005634|GO:0042054
Mepo4g04133 479 ProSiteProfiles AWS domain profile. 31 82 IPR006560 GO:0005634|GO:0042054
Mepo4g04133 479 SUPERFAMILY SET domain 11 219 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04133 Mepo-Chr4 51088552 51094629 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04133 66 200 C2H2 Transcription Factor Family AT2G23740 37.255 1.39e-20 93.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo4g04133 SET 1.1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04133 - - gmx:100804657 759.599
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04133 4 51088552 51094629 Mepo4g04133 4 51088552 51094629 ECH