Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04132 ATGGATCACGCTGCCCTAGGCGTTCTCGCCGCCATCGCCAGCTTCTTCGTCGTCACAATCATACTCGCCGCCATCATCCTCATCTGCCAACACCGCAAAACCACCCAAACCCGCCGTAACAACCAGATCCGAACCCGACCACTTCGAAACCCAAATCACTACCCAACCAGCTCCTCCTCCCTCCCCGTCGACGCCAGCTGGTCATGGGATCCAAATCTGAAAATCTCCATGGAAGAACTCTCACGCGCTACTAATAATTTCTCCAATACCCTCATCGTCGGCGATGGTAGCTTCGGCTATGTTTACAAAGCTTGTCTCTCCACCGGCGCTACCGTCGCCGTCAAAAAACTCTCCCCTGATGCTTTTCAAGGCTTCCGTGAATTCGCAGCGGAGATGGAAACGCTAAGCAAACTCCGCCACCATAACATCGTCAAAATCCTCGGGTATTGGGCTTCTGGACCTGAACGGTTACTCGTTTACGAGTTCATTGAAGAAGGAAACCTCGATCAGTGGCTTCATGAATCATCTCCAACCTCTTCCACTCACCACCAAAACGATGAGGTTTCTATTTCAATCGATTTTATTCGTTCTCCTTTGTCTTGGGTAACACGTGTCAAAATCATGCGTGGTGTTGCTCATGGGCTTTGTTATTTACACGGGCTTGAAAAGCCCATTATTCATCGAGATATCAAGGCCAGTAATGTTTTGTTGGACTCTGAGTTTGAGGCCCATATAGCTGATTTCGGACTCGCACGTAGGATGGATAAATCGCATTCGCACGTGTCAACTCAGGTGGCGGGTACTATCGGTTACATGCCACCTGAGTATCGAGATGGGTCTAATGTAGCAAACCCGAAAGTGGATGTGTATAGTTTCGGAGTGTTGATGATTGAAACCGTGTCGGGCCATAGGCCCAATTTGGCTGTGAAATTGGAAGGAAGTGATATTGGGCTTGTTAATTGGGCCAGGAAGATGAAGGAAAGGAACACTGAAATGGAAATGTTGGATGTAAATATTCCAAGAGAAGAAGGTTTGAAGGAGGAGAGTGTTAGGGAGTATGTACGTGTTGCTTGTATGTGCACTGGTGAGTTACAGAAAGATAGACCTGAAATGCCAGAGGTTGTTAGATTATTGGACTCAATGCCCCTATGA 1152 0.4783 MDHAALGVLAAIASFFVVTIILAAIILICQHRKTTQTRRNNQIRTRPLRNPNHYPTSSSSLPVDASWSWDPNLKISMEELSRATNNFSNTLIVGDGSFGYVYKACLSTGATVAVKKLSPDAFQGFREFAAEMETLSKLRHHNIVKILGYWASGPERLLVYEFIEEGNLDQWLHESSPTSSTHHQNDEVSISIDFIRSPLSWVTRVKIMRGVAHGLCYLHGLEKPIIHRDIKASNVLLDSEFEAHIADFGLARRMDKSHSHVSTQVAGTIGYMPPEYRDGSNVANPKVDVYSFGVLMIETVSGHRPNLAVKLEGSDIGLVNWARKMKERNTEMEMLDVNIPREEGLKEESVREYVRVACMCTGELQKDRPEMPEVVRLLDSMPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04132 383 SUPERFAMILY Protein kinase-like (PK-like) 53 377 IPR011009 -
Mepo4g04132 383 ProSitePatterns Protein kinases ATP-binding region signature. 93 116 IPR017441 GO:0005524
Mepo4g04132 383 Gene3D Transferase(Phosphotransferase) domain 1 163 382 - -
Mepo4g04132 383 FunFam Phytosulfokine receptor 2 163 382 - -
Mepo4g04132 383 ProSiteProfiles Protein kinase domain profile. 87 383 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04132 383 Gene3D Phosphorylase Kinase; domain 1 55 162 - -
Mepo4g04132 383 FunFam Phytosulfokine receptor 2 47 162 - -
Mepo4g04132 383 SMART serkin_6 87 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04132 383 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 4 380 - -
Mepo4g04132 383 MobiDBLite consensus disorder prediction 38 60 - -
Mepo4g04132 383 CDD STKc_IRAK 93 381 - -
Mepo4g04132 383 Pfam Protein tyrosine and serine/threonine kinase 93 377 IPR001245 GO:0004672|GO:0006468
Mepo4g04132 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 225 237 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04132 Mepo-Chr4 51086574 51088230 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04132 4 378 Receptor kinase-like Gene Family AT5G07280 38.542 6.50e-71 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Mepo4g04132 PK_Tyr_Ser-Thr 5.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04132 - - mtr:11410577 728.013