Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04130 ATGGGCTGTGTTCAAGCCAAACCATTAGAATCTGAAGCTAACTATAGAGGACTAGACAGGTTCAAAATGGAAAATGGTTATGTTCCAAGTTCTGATTTTGTTGCACACAGAAGATCTACTGGTCAGAGTCAAAAACATGTTGAGAAGGGTAAGGATATTGATCATCATGTACATCAGAGACAACCCAGAAAGCATAAAGCAGTTGATCGCAATGGTGGTGCAAGAGGAAAGAGAGATGGTGATTTGAAAGATAGTAAGAAGCAATTGAATAAGTGTTTTGATGATGAGATGGTGGATGGTTGGCCTAAATGGTTGGTTGATAATGTTCCTTCTCAAGTGTTGGCTGGTGTAGTTGCTAAGAGTGCCGAGTCTTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTGGATCGAGACACCGGAGATATTGTGGCCCTCAAAAAGGTTCGCTTCAATACATCACAGCCTGAAAGCATTAAATTTATGGCAAGAGAAATAACTATATTACAGAGATTGGATCATCCCAATGTAGTAAAACTTAAAGGGTTAGCCACTTCAAGAATGCAGTACAGCATATATCTAGTTTTTGATTTCATGCCAACGGATTTGTCAAGAATTATTTCTCGGCCTGGAGAAAGACTAACCGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGCCATGATAGAGGAATTTTGCATCGAGATATAAAAGGGTCAAATCTTTTGATTGATAAAAATGGGATGCTTCAGATTGCAGATTTTGGACTTGCCAATTATTATAGTCCAAATCAAGACCAGCCTCTCACAAACAGGGTTGTGACGCTATGGTACAGAGCTCCTGAATTGTTGTTAGGTTCCACCGATTATGGAGTTGGTATTGATCTATGGAGTGTTGGATGTCTCCTTGCAGAAATGTTTAAAGGAATTCCAATCATGCCTGGAAGAACAGAGGTTGAGCAACTTCATAGAATTTTTAGGTTATGTGGCACACCGTCGCAAGAGTATTGGAGAAAGCTGAAACTTTCTACAACTTTTGTACCTCCAAAGTCTTATAGACCAAGTCTGGTAGAAACTTTCAACGATCTGCCCCCATCTTCTTTAGGTCTTTTATGTACTCTTCTTGCTTTGGATCCTGCATTTCGAGGCAGTGCGTCTAAAGCTCTTAAAAATCCGTTTTTCTTTACAAGCCCATTGGCTTGTGATCTATCTGGTCTGCCTGCAATCTACAAAGAAGAAGATGAGCATACTCCAGCCAAAGAACAGATAAAGTATATTAACTCTAAAATCAGGCGCTCTCGTACATTTATGGAGCGTCGCAAGAATTTAGCATCTAATAAGCCAATGGAACATACTGTATCCTCTAAAGACGTATTGAGAAATAATGCTGAGGCTGAAACTTATGTTCCAAGTGAAGAACCAGGTAGTGCAACAAGTAGTACTTCATCAAGTGTAAACCAAGCTGGAGTTGGGGACCACTCACCCCTCTTTCTCTCTCCATTTCATGGTTCTGATCAAAAGCAGCCCCACAAAATCCATAGTAGGCGTGCAAATATTGGAGAAAAAAACATCAAGAACCTTCCTCCATTATCCAAGCCAAAACCAAATGCAACCAAGAAAGATGATGGCAGATACAGAACAGACCAGATTTTCAGGTCCACTTCCACCAGAGAATTTAGAAAGTTAAAAACAGAAGAACATTTACTCTTTGATTAG 1755 0.3983 MGCVQAKPLESEANYRGLDRFKMENGYVPSSDFVAHRRSTGQSQKHVEKGKDIDHHVHQRQPRKHKAVDRNGGARGKRDGDLKDSKKQLNKCFDDEMVDGWPKWLVDNVPSQVLAGVVAKSAESYKMIDKVGQGTYSNVYKALDRDTGDIVALKKVRFNTSQPESIKFMAREITILQRLDHPNVVKLKGLATSRMQYSIYLVFDFMPTDLSRIISRPGERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKNGMLQIADFGLANYYSPNQDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSVGCLLAEMFKGIPIMPGRTEVEQLHRIFRLCGTPSQEYWRKLKLSTTFVPPKSYRPSLVETFNDLPPSSLGLLCTLLALDPAFRGSASKALKNPFFFTSPLACDLSGLPAIYKEEDEHTPAKEQIKYINSKIRRSRTFMERRKNLASNKPMEHTVSSKDVLRNNAEAETYVPSEEPGSATSSTSSSVNQAGVGDHSPLFLSPFHGSDQKQPHKIHSRRANIGEKNIKNLPPLSKPKPNATKKDDGRYRTDQIFRSTSTREFRKLKTEEHLLFD 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04130 584 SUPERFAMILY Protein kinase-like (PK-like) 121 411 IPR011009 -
Mepo4g04130 584 SMART serkin_6 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04130 584 Pfam Protein kinase domain 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04130 584 MobiDBLite consensus disorder prediction 453 562 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 36 86 - -
Mepo4g04130 584 FunFam probable serine/threonine-protein kinase At1g54610 112 207 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 460 474 - -
Mepo4g04130 584 ProSiteProfiles Protein kinase domain profile. 125 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04130 584 Gene3D Phosphorylase Kinase; domain 1 114 207 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 39 57 - -
Mepo4g04130 584 ProSitePatterns Serine/Threonine protein kinases active-site signature. 245 257 IPR008271 GO:0004672|GO:0006468
Mepo4g04130 584 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Mepo4g04130 584 PANTHER CELL DIVISION PROTEIN KINASE 123 412 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 66 86 - -
Mepo4g04130 584 Gene3D Transferase(Phosphotransferase) domain 1 208 444 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 548 562 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 519 533 - -
Mepo4g04130 584 MobiDBLite consensus disorder prediction 485 503 - -
Mepo4g04130 584 FunFam Putative serine/threonine-protein kinase 208 445 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04130 Mepo-Chr4 51058207 51061847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04130 119 468 Core Cell Cycle Gene Families AT5G10270 42.391 1.35e-93 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Mepo4g04130 Pkinase 1.3e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04130 K08819 - gmx:100776854 830.476