Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04107 ATGGCCAACATAACAAAGATACAAGTAATAACTTCTCTTTCACCTGATGGACAAGCACTTCTTTCTCTTGCAACATCATCACCTTCTCTTCTCTCTTCATGGAACCCTTCAACATCAACACCATGTTCATGGAAAGGCATAACTTGTTCACCACAATCTAGAGTAATTTCCCTTTCTATCCCAGATACTTTCCTCAACCTCACTTCTTTACCATCTCAACTATCCTCTTTAACAATGCTTCAGCTTCTCAACCTCTCTTCAACCAATCTCTCTGGCTCAATCCCACCTTCTTTTGGTCAACTCTCCCATCTTCAACTCCTTGACCTCTCCTCAAACTCTCTCACTGGTTCCATTCCTAATGAACTTGGAAGCCTCTCTTCTCTTCAATTCCTTTTCTTAAACTCAAACAGATTAGCAGGAACCATTCCACAACAGCTTTCAAATCTCACTTCACTTGAAGTTCTTTGTCTTCAGGACAATCTTCTCAATGGCTCAATCCCTTCACAACTAGGCTCTTTGAAATCTCTTCAACAGTTTAGGCTAGGTGGTAACCCTTTTCTCACTGGAGAACTCCCTTCACAGTTAGGACTATTAACCAACCTCACCACATTTGGTGCAGCTGCAACTTCACTTTCAGGTTCAATTCCCTCTTCATTTGGAAACTTGATCAATCTACAAACTCTAGCACTTTATGATACAGAAATATCTGGTTCAATACCACCTGAACTTGGTTTGTGTTCTGAGTTGAGGAATCTTTATTTACACATGAATAATCTCACTGGCTCTATTCCTTTTCAATTAGGTAAGTTGCAAAAACTTACTAGTTTGCTTCTTTGGGGGAATACATTATCTGGTAAAATCCCTTCTGAAATTTCAAACTGTTCATCATTGGTTATATTTGATGTATCATCTAATGATCTCACTGGTGAAATACCTGGTGATTTTGGGAAGCTAGTTGTTCTTGAACAGCTTCATTTATCAGATAATTCGCTCACCGGTCAAATACCGTGGCAGTTGAGTAACTGCACAAGCCTTGCAACTGTCCAGCTTGACAAGAATCAGTTATCAGGTACAATTCCTTATCAGCTTGGAAAGTTGAAGGTTCTGCAGAGTTTTTTCTTGTGGGGGAATTTGGTTTCTGGAACTATACCGTCCTCTTTTGGGAACTGTTCAGAACTGTATGCACTTGATCTTTCAAGGAATAAATTAACAGGTTCAATACCAGATGAGATTTTCAGTTTGCAGAAGCTGAGTAAGCTTCTGCTTCTTGGAAATTCATTAACAGGAAGGTTACCAGCAAGTGTTGCTAACTGTCAGTCTTTGGTTAGATTGAGAGTTGGAGAGAATCAGCTTTCAGGAGAGATTCCTAAAGAGATAGGACAGTTGCAGAATCTTGTGTTTCTTGATTTGTACATGAATCATTTCTCCGGAAGATTACCGGTTGAGATTGCAAACATCACAGTTCTTGAGCTATTAGATGCTCATAACAACTATCTCGGCGGAGAAATTCCGTCCCTGATTGGTGAGCTTGAAAATTTGGAGCAGCTTGATCTTAGTAGAAACAGTTTGGCAGGTTCAATACCAAAATCTGTTAGAAATTTACAGAAGCTAACTCTTTTGGATTTGAGTTATAATAGCTTATCTGGTAGCATACCTCCAGAGATTGGTCATGTTACAAGCCTAACAATCAGTTTGGATTTGAGCTCAAATTCATTCATTGGTGAAATACCTGATTCAATGTCTGTTTTGACACAGTTACAATCACTTGATCTTTCAAGGAACATGCTTTTTGGAGGAATTAAGGTTCTTGGTTCTCTTACTAGTCTCACTTCACTCAATATCTCCTACAACAACTTCTCAGGTCCTATTCCAGTAACTCCATTCTTCAAAACTCTAACTTCTAGTTCATATCTTCAGAACCGGCATCTGTGTCAGTCCATTGACGGCACCACATGCTCTTCAGGTCTGATTCAAAAGAATGGTTTGAAATCTGCAAAAACCGTAGCTATGATCACAATTATTCTAGCTTCGGTCACCATAATTATCATTGCGTCGTGGATTCTAGTAACTCGTAGTAATCATCGGTACAATGTTGAAAAGGCTTTGAGGATATCAGGTTCCGCGTCAGGAGCTGAGGATTTCTCTTATCCTTGGACTTTCATACCATTTCAGAAACTGAATTTCAGCATAGAAAATATATTGGATTGCTTGAAAGATGAAAATGTGATTGGAAAAGGTTGTTCTGGTGTTGTGTATAAGGCTGAGATGCCGCGCGGAGAGGTAATAGCAGTGAAGAAGCTTTGGAAAACAAGCAAAGGAGATGAAATGGTTGATTCTTTTGCTGCTGAGATTCAGATTCTCGGCTACATTCGGCATAGGAACATTGTGAGGCTCATAGGTTATTGTTCTAATGGGAGTGTTAAGCTTCTTCTCTACAACTTTATCCAAAATGGTAATCTAAGACAACTTTTGGAAGGGAATAGGAACTTAGACTGGGAAACTAGATACAAGATTGCTGTTGGTTCAGCTCAAGAGTATGGCTACACCATGAACATAACAGAAAAGAGCGACGTCTACAGTTATGGAGTGGTTTTACTAGAGATACTAAGTGGGAGAAGTGCAGTTGAAGATGGACAACACGTTGGAGATGGACAACACATAGTTGAATGGGTGAAGAAGAAGATGGCAAGCTTTGAACCAGCTGTGTCAATACTAGATACAAAGCTTCAAAGTCTACCGGATCAAATAGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGTGTGAATTCTTCGCCGGTTGAACGTCCAACTATGAAGGAAGTTGTTGCATTACTGATGGAAGTGAAGAGTCAGCCTCATGAGGAGATGGGGAAAACCTCTCAACCTTTAATCAAGCAGTCATCAACTCAATGCTGA 2925 0.3973 MANITKIQVITSLSPDGQALLSLATSSPSLLSSWNPSTSTPCSWKGITCSPQSRVISLSIPDTFLNLTSLPSQLSSLTMLQLLNLSSTNLSGSIPPSFGQLSHLQLLDLSSNSLTGSIPNELGSLSSLQFLFLNSNRLAGTIPQQLSNLTSLEVLCLQDNLLNGSIPSQLGSLKSLQQFRLGGNPFLTGELPSQLGLLTNLTTFGAAATSLSGSIPSSFGNLINLQTLALYDTEISGSIPPELGLCSELRNLYLHMNNLTGSIPFQLGKLQKLTSLLLWGNTLSGKIPSEISNCSSLVIFDVSSNDLTGEIPGDFGKLVVLEQLHLSDNSLTGQIPWQLSNCTSLATVQLDKNQLSGTIPYQLGKLKVLQSFFLWGNLVSGTIPSSFGNCSELYALDLSRNKLTGSIPDEIFSLQKLSKLLLLGNSLTGRLPASVANCQSLVRLRVGENQLSGEIPKEIGQLQNLVFLDLYMNHFSGRLPVEIANITVLELLDAHNNYLGGEIPSLIGELENLEQLDLSRNSLAGSIPKSVRNLQKLTLLDLSYNSLSGSIPPEIGHVTSLTISLDLSSNSFIGEIPDSMSVLTQLQSLDLSRNMLFGGIKVLGSLTSLTSLNISYNNFSGPIPVTPFFKTLTSSSYLQNRHLCQSIDGTTCSSGLIQKNGLKSAKTVAMITIILASVTIIIIASWILVTRSNHRYNVEKALRISGSASGAEDFSYPWTFIPFQKLNFSIENILDCLKDENVIGKGCSGVVYKAEMPRGEVIAVKKLWKTSKGDEMVDSFAAEIQILGYIRHRNIVRLIGYCSNGSVKLLLYNFIQNGNLRQLLEGNRNLDWETRYKIAVGSAQEYGYTMNITEKSDVYSYGVVLLEILSGRSAVEDGQHVGDGQHIVEWVKKKMASFEPAVSILDTKLQSLPDQIVQEMLQTLGIAMFCVNSSPVERPTMKEVVALLMEVKSQPHEEMGKTSQPLIKQSSTQC 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04107 974 Pfam Leucine rich repeat 80 138 IPR001611 GO:0005515
Mepo4g04107 974 Pfam Leucine rich repeat 369 427 IPR001611 GO:0005515
Mepo4g04107 974 Gene3D Transferase(Phosphotransferase) domain 1 725 845 - -
Mepo4g04107 974 SMART LRR_typ_2 390 414 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 510 533 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 583 610 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 534 558 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 149 173 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 125 148 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 270 294 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 77 100 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 318 342 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 101 124 IPR003591 -
Mepo4g04107 974 SMART LRR_typ_2 222 246 IPR003591 -
Mepo4g04107 974 Gene3D Ribonuclease Inhibitor 167 263 IPR032675 -
Mepo4g04107 974 Gene3D Ribonuclease Inhibitor 16 166 IPR032675 -
Mepo4g04107 974 PANTHER LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1 565 683 - -
Mepo4g04107 974 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 713 814 - -
Mepo4g04107 974 Gene3D Ribonuclease Inhibitor 264 362 IPR032675 -
Mepo4g04107 974 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 185 404 - -
Mepo4g04107 974 SUPERFAMILY L domain-like 26 379 - -
Mepo4g04107 974 PRINTS Leucine-rich repeat signature 104 117 - -
Mepo4g04107 974 PRINTS Leucine-rich repeat signature 510 523 - -
Mepo4g04107 974 SUPERFAMILY RNI-like 311 637 - -
Mepo4g04107 974 Pfam Leucine Rich Repeat 512 534 IPR001611 GO:0005515
Mepo4g04107 974 Pfam Protein tyrosine and serine/threonine kinase 845 947 IPR001245 GO:0004672|GO:0006468
Mepo4g04107 974 SUPERFAMILY Protein kinase-like (PK-like) 714 953 IPR011009 -
Mepo4g04107 974 ProSitePatterns Protein kinases ATP-binding region signature. 743 766 IPR017441 GO:0005524
Mepo4g04107 974 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g34110 13 169 - -
Mepo4g04107 974 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 405 655 - -
Mepo4g04107 974 Pfam Protein kinase domain 739 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04107 974 ProSiteProfiles Protein kinase domain profile. 737 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04107 974 SMART LRR_sd22_2 125 151 - -
Mepo4g04107 974 SMART LRR_sd22_2 510 536 - -
Mepo4g04107 974 SMART LRR_sd22_2 583 608 - -
Mepo4g04107 974 Pfam Leucine rich repeat N-terminal domain 14 50 IPR013210 -
Mepo4g04107 974 Gene3D Transferase(Phosphotransferase) domain 1 846 971 - -
Mepo4g04107 974 Gene3D Ribonuclease Inhibitor 363 654 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04107 Mepo-Chr4 50836826 50846985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04107 12 968 Receptor kinase-like Gene Family AT5G56040 40.965 0.0 707
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g04107 PK_Tyr_Ser-Thr 2.7e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04107 - - tpra:123903867 1529.61