Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04096 ATGGGTGCGGTATCGGAATCTGCTTCTGCTGATTGTTTCAGTGAGGTGATGTCGTCGATGCCCGGTTTTCGCTTCCATCCAACAGATGAGGAGTTGGTGATGTATTATCTGAAAAGGAAGATTTGTGGGAAGAAGTTGAAGTTCAACGTTATCAAAGAAACTGATGTGTACAAGTGGGATCCTGAGGATTTGCCTGAACAATCTTTCTTGAAAACTGGAGATAGGCAATGGTTCTTTTTCTGTCATAGAGATAGGAAGTATCCTAACGGTGGAAGGTCTAGCCGAGCAACTAGACATGGCTACTGGAAAGCTACTGGAAAAGATCGAAATGTGATATACAATTCTCGGTCAGTTGGAGTGAAAAAGACACTTGTTTTCTATCTTGGCAGAGCTCCTAGTGGTGAGCGAACTGATTGGGTTATGCATGAGTACACCATGGATGAAGATGAGCTTAAGACATGCTGTGATGTTAAGGACTATTATGCACTTTACAAGGTTTTCAAGAAAAGTGGACCGGGTCCTAAGAACGGTGAACAGTATGGCGCACCATTTAAAGAAGAAGAATGGGCAGATGACGATGTTGTAGATTTTAATGTAAATTCAGTTGACCGGGAGGTTCCAGAGGCTGCTATTGACAATGTTATTGATCAGCATCAGCTGCAGCCGTTGTTTGATGACGAAATTGATGAAATCATTAAAGGGATGCTTGATGTTGAGCCTGTCCTTGACCAGCAACATGTGAATGGTTATGTTGACTTTCCTCAGGTTGCTGATGAAGAAACACGAAATATGGTCATGGATCAATTCTACGAGGCCATGATATTCCCTGATCCAAGTGAAAAACAGCAATCTAGCAGTCAGCTTTATGATGCGCAGCCCAGCTTTGACTTCAAGCATCAATCAGTTGATTCTCACTTGTGTATTTCTGAAGCACCCGAGGTCACTTCCACTCCGAACATTCAAAGCGAGGAGGGGCTTGTCTTTTATGAGGAAGGCTTCTTGGAAATTAATGATCTCATTGATACCGAATCTACATTTTCAAATACGGATAAGCTTAACAACGATCTCATTGAGAACCTCCAGTTTGAAGATGTGTTAAGTGAATTTGATCCTTACCAAGATGCAGAGATGTTTCTCTGTGGCCTGGGGTCTATTAACGAAGAAACAGTTTCACATGCATATATGAACAACACTGGCAGCAATATTGAAAATCAGAGTTACCAGTTGTTGTCCAATCCAGAAGACGCAAATCAAACTGTTGATGAATTCTGGATGCACGTTGAAAGAAACACCCGCAGTCCAGCTGAAGGTTATGATGGTTCTTTCTCTCTAACAAATCCAGGTGTTGTGTGTGACTCTGTTGGCTTTCCTACTGAAAGCACTGAAAATCAAAGAAGCATCGTAGAAGATGTTAAAACAAGTAGAATCTCCTCTGCTCTGTGGGCCTTTGTTGATTCAATACCTACCACTCCTGCATCAGCTGCTGAAAATCCCTTGGTGAATCGGGCTTTGAATCGAATGTCTAGCTTCAGCAGGGTGAAGATCAAGCCCACCGACAACAACATTGCAGCAGGTAATAATGACACTGCAACTATGAAGAGACCAGGCAGAAAGGGAGTCTCATTCCTTTTCTTCCCGATTCTTATTGCTTTATGTGCTTTCTTGTGGATTTCTATTGGAAATTTAAGACTATTAGGGAGGTGCGCCTCCCCTTGA 1716 0.4242 MGAVSESASADCFSEVMSSMPGFRFHPTDEELVMYYLKRKICGKKLKFNVIKETDVYKWDPEDLPEQSFLKTGDRQWFFFCHRDRKYPNGGRSSRATRHGYWKATGKDRNVIYNSRSVGVKKTLVFYLGRAPSGERTDWVMHEYTMDEDELKTCCDVKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWADDDVVDFNVNSVDREVPEAAIDNVIDQHQLQPLFDDEIDEIIKGMLDVEPVLDQQHVNGYVDFPQVADEETRNMVMDQFYEAMIFPDPSEKQQSSSQLYDAQPSFDFKHQSVDSHLCISEAPEVTSTPNIQSEEGLVFYEEGFLEINDLIDTESTFSNTDKLNNDLIENLQFEDVLSEFDPYQDAEMFLCGLGSINEETVSHAYMNNTGSNIENQSYQLLSNPEDANQTVDEFWMHVERNTRSPAEGYDGSFSLTNPGVVCDSVGFPTESTENQRSIVEDVKTSRISSALWAFVDSIPTTPASAAENPLVNRALNRMSSFSRVKIKPTDNNIAAGNNDTATMKRPGRKGVSFLFFPILIALCAFLWISIGNLRLLGRCASP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04096 571 Gene3D NAC domain 28 171 IPR036093 GO:0003677|GO:0006355
Mepo4g04096 571 Pfam No apical meristem (NAM) protein 21 145 IPR003441 GO:0003677|GO:0006355
Mepo4g04096 571 ProSiteProfiles NAC domain profile. 19 169 IPR003441 GO:0003677|GO:0006355
Mepo4g04096 571 FunFam Nac domain-containing protein 86 28 172 - -
Mepo4g04096 571 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 279 - -
Mepo4g04096 571 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04096 Mepo-Chr4 50695777 50700012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04096 4 567 NAC Transcription Factor Family AT1G34190 42.761 2.97e-137 408
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g04096 NAM 6.2e-36 No_clan