Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04092 ATGTATCTTGGTGTTAGAAAAAGACCATGGGGAAAATATGCAGCTGAAATTAGGAACCCATATACCAAAGAGAGACATTGGTTAGGCACATTTGACACTGCAGAAGAAGCTGCAGTGGCCTATGATATTTCATCTATTAAGATTTGTGGCATTGATAATGCTAGAACTAATTTTCATTACCCTTTTGTATCTATTCCTCAACAACCTCCTCTGCCATTACTTCCTGCACCCCCACCAGCCACCTCAGAGTTGGATGCAAGTATCCCAGAGATGAATTTTGCTTTTGATGGTGATGATGAATCTATGGTTATTGCTTCTATCTTGCAAAGTTTTTCTAATTCTGGTAGCTGTTCTTTATAA 360 0.3861 MYLGVRKRPWGKYAAEIRNPYTKERHWLGTFDTAEEAAVAYDISSIKICGIDNARTNFHYPFVSIPQQPPLPLLPAPPPATSELDASIPEMNFAFDGDDESMVIASILQSFSNSGSCSL 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04092 119 Gene3D AP2/ERF domain 1 60 IPR036955 GO:0003700|GO:0006355
Mepo4g04092 119 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 2 78 - -
Mepo4g04092 119 FunFam Ethylene-responsive transcription factor 2 1 60 - -
Mepo4g04092 119 ProSiteProfiles AP2/ERF domain profile. 1 59 IPR001471 GO:0003700|GO:0006355
Mepo4g04092 119 CDD AP2 2 58 IPR001471 GO:0003700|GO:0006355
Mepo4g04092 119 PRINTS Ethylene responsive element binding protein signature 2 13 IPR001471 GO:0003700|GO:0006355
Mepo4g04092 119 PRINTS Ethylene responsive element binding protein signature 24 40 IPR001471 GO:0003700|GO:0006355
Mepo4g04092 119 SUPERFAMILY DNA-binding domain 2 60 IPR016177 GO:0003677
Mepo4g04092 119 Pfam AP2 domain 4 43 IPR001471 GO:0003700|GO:0006355
Mepo4g04092 119 SMART rav1_2 1 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04092 Mepo-Chr4 50648556 50648915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04092 2 84 AP2-EREBP Transcription Factor Family AT1G12890 59.524 7.95e-28 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo4g04092 AP2 3.9e-09 CL0081