Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04087 ATGGAGGAGACAAAGTTCTGTGCTTTAGCTTTCATTTGTGCCTTCTTTCTGTTGCTGCTTCATCCATTATGGCTGGTTTCTGCTAACATGGAAGGTGATGCTTTACATAACTTGAGGACAAATTTACAAGATCCTAACAATGTTTTGCAGAGTTGGGATCCTACACTTGTTAATCCTTGTACATGGTTTCATGTAACCTGCAACAATGATAATAGTGTCATAAGAGTTGATCTGGGAAATGCTGCTTTATCGGGCACACTAGTTCCACAGCTTGGGCAACTCAAGAATTTGCAGTATCTGGAACTATACAGCAATAACATCACTGGTCCTATTCCAAGTGACCTGGGGAATCTTACAAACTTGGTGAGCTTGGATCTGTACCTAAATCGGTTCAATGGCCCTATCCCTGATTCATTGGGCAAGTTGTCAAAATTGCGTTTCCTCCGGCTTAATAACAACAGTTTGATGGGTCCTATTCCCATGTCACTGACTAATATTTCAGCTCTCCAAGTTCTGGATTTGTCTAATAACCAGCTCTCAGGCGTGGTTCCCGATAATGGCTCCTTTTCGTTATTCACTCCTATCAGTTTTGCAAACAACTTGAATCTATGCGGACCTGTTACCACGCACCCTTGTCCAGGCTCTCCTCCATTTTCTCCACCTCCCCCATTTGTCCCTCCACCTCCAATTTCTGCCCCAGGAAGTGGCGGTGCAACTGGAGCAATAGCTGGAGGAGTTGCTGCCGGTGCCGCTCTATTATTTGCTGCGCCTGCAATTGCATTTGCATGGTGGCGTCGAAGGAAACCACAAGAATTTTTCTTTGATGTTCCTGCTGAAGAGGATCCTGAAGTTCATCTTGGGCAGCTTAAGAGGTTCTCACTGCGAGAGTTGCAAGTTGCAACAGATACTTTCAGCAATAAGAACATTCTTGGAAGAGGAGGGTTTGGCAAGGTGTACAAAGGACGTTTGGCAGACGGTTCACTGGTTGCTGTCAAAAGATTAAAAGAGGAGCGGACACCTGGTGGGGAGCTTCAGTTTCAGACTGAAGTAGAGATGATCAGTATGGCTGTGCATAGAAATCTCCTCCGTTTACGTGGGTTTTGTATGACACCAACAGAAAGGTTACTTGTTTATCCCTACATGGCTAATGGAAGTGTTGCCTCCTGTTTAAGAGAGCGTCCTCCACATCAAGAACCACTGGATTGGCCAACAAGGAAAAGAATAGCTTTGGGATCAGCAAGGGGTCTTTCATATTTGCATGATCATTGTGACCCAAAGATCATTCATCGTGACGTGAAAGCTGCTAACATATTGTTGGATGAAGAGTTTGAGGCTGTTGTGGGGGATTTTGGATTGGCAAAACTTATGGATTACAAGGACACTCATGTTACAACTGCTGTTCGGGGTACAATCGGGCATATAGCTCCCGAGTACCTATCTACTGGCAAATCTTCAGAGAAAACCGATGTTTTTGGTTATGGTATCATGCTTCTTGAGCTTATCACGGGACAAAGAGCTTTTGACCTTGCTCGACTTGCGAATGATGATGATGTTATGCTGCTTGATTGGGTAAAAGGACTTCTGAAAGAGAAAAAGCTTGAAATGTTGGTTGATCCCGATCTTAAAACCAATTACATAGAAGCTGAGGTAGAACAGTTAATCCAGGTTGCGCTGCTATGCACGCAAGGTTCACCTATGGACCGGCCGAAGATGTCAGATGTAGTGAGAATGCTTGAAGGCGACGGCTTGGCAGAAAGATGGGATGAGTGGCAAAAAGGGGAAGTTCTACGCCAGGAAGTGGAATTGGCACCTCATCCCAATTCTGATTGGATTGTTGACTCTACTGAAAATCTACATGCAGTTGAATTATCTGGTCCAAGTGGATTGAACACTACCAGACAGCCGCCGCCGCCGCCGCCGCCGTCTCAATTCTCAGGTTTAGAGACTTTAAAATTTTACATTGATACTTTAAGCAATACAATGAGTGATCCAAATCATCATAGTGATGATGAATTCAACAACGATGAAAACGAAGACAACAATGATGTTTTCATTGATGACTCTGATATCATCCATGAAGTTGCCTCCGACGATGAACTTCTTCCTGATGCATCTGACGACCCCGATCCTCCTGCCGCCGGTCCTCCTGGTGGCCCTCCCAGTCCAGGTGGTGGTGGTGGTAGTAGTGGCGGTGGCGATGACGTTGATGATGATTCTGTGCATACATTCACTGGTCATGATGGGGAGTTATATACAGTTGCCTGCAGCCCAACAGACGAGGCACTGGTGGCAACAGGAGCTGGTGATGACGTAGGATTTCTCTGGAGGATCCTTAATGGAGAATGGGCTTCCCAGCTTAATGGTCATACAGATTCTGTATCGAGTTTAGGGTTTAGCCACGATGGAGCGTTTCTGGCATCAGGAAGTTTTGATGGAACTGTTAAAATCTGGGATGCATCTGGAAATCTGAAAGGCACGCTTGATGGTCCTGAAGGGGGTGTTGAGTGGCTCAGGTGGCATCCAAGAGGAAACGTCCTCATTGCTGGTTTTGATGAATCCTCCTCAGTGTGGATGTGGAATAGTAATCTTGACTTCCTTATGTCGTTTAATGGTCACGCTGGTAGTGTGACCTGTGGTGATTTTACTCCCGATGGGAGAACAATATGTACTGGTTCTGACGATGCAACCTTGAGAATATGGAACCCAAAAAGTGGAGAAAGCATTCATGTTGTGCGAGGTCATCCATACCATACCGAGGGATTAACATGTTTAGCAATAAATTCAACTTCAACTATCGCTCTTACTGGTTCTGTGGATGGATCTGTTCATATTGTGAATATCACTACAGGAAGAGTTGTTAGTACCCTGCCTTCTCATTCAAGTTCCATTGAATGTGTTGGATTCGCACCAAGTGGTTCCTGGGCTGCAATTGGAGGCATGGATAAAATGACCATCTGGGATGTAGAGCACTCCTTAGCCCGAAGCATTTGTGAGCATGAGTATGGAGTGACATGTTCAACCTGGCTTGGCACATCGTATGTGGCTACTGGATCTAATGATGGAGCTGTGAGATTATGGGACAGTCGATCTGGTGAATGTGTCAGAACATTTAGAGGGCACTCTGAAAGCATTCAATCTCTTTCTTTGTCTGCTAATCGCGAGTACCTTGTCTCGGCTTCTTTAGATCATACAGCTCGTGTTTTCGATGTTAAAGGAGTTTGTTAA 3225 0.4512 MEETKFCALAFICAFFLLLLHPLWLVSANMEGDALHNLRTNLQDPNNVLQSWDPTLVNPCTWFHVTCNNDNSVIRVDLGNAALSGTLVPQLGQLKNLQYLELYSNNITGPIPSDLGNLTNLVSLDLYLNRFNGPIPDSLGKLSKLRFLRLNNNSLMGPIPMSLTNISALQVLDLSNNQLSGVVPDNGSFSLFTPISFANNLNLCGPVTTHPCPGSPPFSPPPPFVPPPPISAPGSGGATGAIAGGVAAGAALLFAAPAIAFAWWRRRKPQEFFFDVPAEEDPEVHLGQLKRFSLRELQVATDTFSNKNILGRGGFGKVYKGRLADGSLVAVKRLKEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPHQEPLDWPTRKRIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLKTNYIEAEVEQLIQVALLCTQGSPMDRPKMSDVVRMLEGDGLAERWDEWQKGEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPSGLNTTRQPPPPPPPSQFSGLETLKFYIDTLSNTMSDPNHHSDDEFNNDENEDNNDVFIDDSDIIHEVASDDELLPDASDDPDPPAAGPPGGPPSPGGGGGSSGGGDDVDDDSVHTFTGHDGELYTVACSPTDEALVATGAGDDVGFLWRILNGEWASQLNGHTDSVSSLGFSHDGAFLASGSFDGTVKIWDASGNLKGTLDGPEGGVEWLRWHPRGNVLIAGFDESSSVWMWNSNLDFLMSFNGHAGSVTCGDFTPDGRTICTGSDDATLRIWNPKSGESIHVVRGHPYHTEGLTCLAINSTSTIALTGSVDGSVHIVNITTGRVVSTLPSHSSSIECVGFAPSGSWAAIGGMDKMTIWDVEHSLARSICEHEYGVTCSTWLGTSYVATGSNDGAVRLWDSRSGECVRTFRGHSESIQSLSLSANREYLVSASLDHTARVFDVKGVC 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04087 1074 SUPERFAMILY L domain-like 32 200 - -
Mepo4g04087 1074 ProSiteProfiles Protein kinase domain profile. 304 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 786 818 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 906 944 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 1031 1069 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 866 901 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 951 982 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam WD domain, G-beta repeat 999 1027 IPR001680 GO:0005515
Mepo4g04087 1074 MobiDBLite consensus disorder prediction 622 646 - -
Mepo4g04087 1074 SMART serkin_6 304 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04087 1074 MobiDBLite consensus disorder prediction 700 743 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats profile. 996 1036 IPR001680 GO:0005515
Mepo4g04087 1074 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Mepo4g04087 1074 FunFam Somatic embryogenesis receptor kinase 1 273 380 - -
Mepo4g04087 1074 FunFam Somatic embryogenesis receptor kinase 1 27 214 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 996 1032 - -
Mepo4g04087 1074 MobiDBLite consensus disorder prediction 708 722 - -
Mepo4g04087 1074 Gene3D Ribonuclease Inhibitor 27 214 IPR032675 -
Mepo4g04087 1074 SMART WD40_4 779 818 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 949 987 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 904 946 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 989 1027 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 1030 1069 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 736 776 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 862 901 IPR001680 GO:0005515
Mepo4g04087 1074 SMART WD40_4 820 860 IPR001680 GO:0005515
Mepo4g04087 1074 FunFam Angio-associated migratory cell protein-like protein 736 1072 - -
Mepo4g04087 1074 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 10 589 - -
Mepo4g04087 1074 Gene3D - 734 1072 IPR015943 GO:0005515
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 869 906 - -
Mepo4g04087 1074 SUPERFAMILY WD40 repeat-like 739 1071 IPR036322 GO:0005515
Mepo4g04087 1074 Pfam Protein kinase domain 305 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04087 1074 ProSitePatterns Protein kinases ATP-binding region signature. 310 332 IPR017441 GO:0005524
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats profile. 869 910 IPR001680 GO:0005515
Mepo4g04087 1074 Gene3D Phosphorylase Kinase; domain 1 273 380 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1037 1074 - -
Mepo4g04087 1074 MobiDBLite consensus disorder prediction 658 683 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 786 818 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats profile. 1037 1074 IPR001680 GO:0005515
Mepo4g04087 1074 Gene3D Transferase(Phosphotransferase) domain 1 381 598 - -
Mepo4g04087 1074 ProSiteProfiles Trp-Asp (WD) repeats profile. 786 818 IPR001680 GO:0005515
Mepo4g04087 1074 CDD WD40 785 1069 - -
Mepo4g04087 1074 FunFam Somatic embryogenesis receptor-like kinase 1 381 598 - -
Mepo4g04087 1074 ProSitePatterns Trp-Asp (WD) repeats signature. 1014 1028 IPR019775 -
Mepo4g04087 1074 SUPERFAMILY Protein kinase-like (PK-like) 283 579 IPR011009 -
Mepo4g04087 1074 PRINTS G protein beta WD-40 repeat signature 888 902 IPR020472 -
Mepo4g04087 1074 PRINTS G protein beta WD-40 repeat signature 1014 1028 IPR020472 -
Mepo4g04087 1074 PRINTS G protein beta WD-40 repeat signature 805 819 IPR020472 -
Mepo4g04087 1074 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04087 Mepo-Chr4 50581141 50594608 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04087 11 626 Receptor kinase-like Gene Family AT1G71830 89.448 0.0 1043
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Mepo4g04087 Pkinase 8.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04087 K13418 - gmx:100789884 1094.72