Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04061 ATGCCAACAACAAAAGAAGCATTTGGTGGTGTAGAATCTCCAAACGTAGACTCTTCCAACACTCATACCCCTCCCAAACATAGCTCCCGAGAATCATGTGATGTTCCTCCTTTACTCTCTTCTTCTTACCCAATCACTCTTAAGTTCATGGACGTGGGATACCGAATTAAGATAGAGAACAAAACAGCAAAAGGAGGGTGCATCAAGAGACTATTTACACCACTTGAATCATCACCGTCAGATCAAAGATCAACACAAGAGCGAATCATTCTAAATAACGTAACAGGAATAGCTTACCCAGGAGAGATCCTAGCCATCCTAGGCCCATCTGGTAGCGGAAAATCAACGCTCCTAAACTCACTAGCAGGAAGACTTCATACACACAACCTCACCGGAACAATTCTCGCTAACTCATCAAAACTAAACCGCACCATTCTCCGTCGAACCGGGTTCGTTACACAGGATGATATCTTATACCCTCATTTAACTGTTCGGGAAACATTAGTCTTCTGCTCCATGCTTCGTCTCCCGAGACAACTTTCTCGGGAAACGAAGGTGGCAGCAGCAGAGTCCGCGATCGCGGAACTAGGTTTAACAAAGTGTGAAAATACTATCATTGGAAACAGTTTTATTCGCGGAGTTTCCGGTGGAGAGAGGAAGCGCGTGAGTATAGCTCATGAGATGTTGGTGGATCCAGCTCTGTTGATACTAGATGAGCCAACATCTGGACTTGACTCGACGGCTGCGCACCGACTAGTCTCGACGTTGGGATCGTTGGCGAGGAAGGGGAAGACGGTGGTGACCTCGGTGCATCAGCCGTCGAGTCGGGTGTTCCAGATGTTTGATAGAGTGCTTGTGTTGTCAGAGGGAAATTGTATGTATTATGGGAAAGGAGCAGAAGCTATGAGATATTTTGAGTCGGTTGGATTCGCGCCGTCGTTTCCGGTCAATCCGGCGGATTTTCTGCTTGATCTTGCTAACGGTGTTTGCCATGTAGATGGTGTAGGTGAAAAAGATAGACCAAACATAAAGCAAAATCTAATTCATTCATACAACACAGTACTTGGTCCAAAGGTAAAATCTCTTTGTATGGACACAACCAATGCTTCAACCAAAGACAATCATCACCCTTCAAGAAGCAGCTCTTCAAAAGAACGTAGATATAATGACAGAGTTAACATCTTTGATTGGTTTTACCAATTCAGTATTCTTCTCCAAAGAAGCCTCAAAGAAAGAAAATATGAATCTTTCAACACACTAAGAGTTTTTCAAGTTGTTGCTGCTGCTTTACTAGCTGGTTTAATGTGGTGGCATTCAGACTATAAAAACATTCAAGATAGGCTTGGATTACTCTTCTTCATTTCAATCTTTTGGGGTGTATTTCCATCTTTCAACTCTGTATTCGCATTCCCTCAAGAACGCGCAATCTTTGTTAAAGAAAGAGCTTCTGGTATGTACACATTATCATCCTATTTCATGGCTAGAATTGTTGGTGACCTACCAATGGAGCTTCTTCTTCCAACAATTTTCCTCGTCATTACATATTGGATGGGTGGATTGAAGCCTGACTTGCTGTCTTTTCTCTTGACATTGTTGGTTGTTCTTGGATTCGTGCTTGTGTCGCAAGGTCTTGGACTTGCATTAGGTGCTGCAATAATGGATGCTAAACAAGCTTCCACAGTTGCAGCAGTGACAATGCTAGCATTTGTATTAACTGGTGGATACTATGTCCATAAGGTGCCATCTTGTGTAGCTTGGATCAAATACATATCCACAACATTCTATAGTTACAGGTTGTTAACTAGAATTCAATACGGCGATGGCAAGAAAATTGCAAATCTAATCGGTTGCAATCATGTTGGTAGTACTAATGATGGCGCAAGTTGCAAATTTCTTGATGAAGATGTGGTGGGTCAAATTGGCACAATGGGATGCATTGGAGTGTTGTTTTTCATGTTTGTGTTTTACAGATTATTGGCTTACCTTGCCTTGAGGCGTATCAAGAGTTGA 2010 0.4254 MPTTKEAFGGVESPNVDSSNTHTPPKHSSRESCDVPPLLSSSYPITLKFMDVGYRIKIENKTAKGGCIKRLFTPLESSPSDQRSTQERIILNNVTGIAYPGEILAILGPSGSGKSTLLNSLAGRLHTHNLTGTILANSSKLNRTILRRTGFVTQDDILYPHLTVRETLVFCSMLRLPRQLSRETKVAAAESAIAELGLTKCENTIIGNSFIRGVSGGERKRVSIAHEMLVDPALLILDEPTSGLDSTAAHRLVSTLGSLARKGKTVVTSVHQPSSRVFQMFDRVLVLSEGNCMYYGKGAEAMRYFESVGFAPSFPVNPADFLLDLANGVCHVDGVGEKDRPNIKQNLIHSYNTVLGPKVKSLCMDTTNASTKDNHHPSRSSSSKERRYNDRVNIFDWFYQFSILLQRSLKERKYESFNTLRVFQVVAAALLAGLMWWHSDYKNIQDRLGLLFFISIFWGVFPSFNSVFAFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELLLPTIFLVITYWMGGLKPDLLSFLLTLLVVLGFVLVSQGLGLALGAAIMDAKQASTVAAVTMLAFVLTGGYYVHKVPSCVAWIKYISTTFYSYRLLTRIQYGDGKKIANLIGCNHVGSTNDGASCKFLDEDVVGQIGTMGCIGVLFFMFVFYRLLAYLALRRIKS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04061 669 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 47 314 IPR003439 GO:0005524
Mepo4g04061 669 Gene3D - 82 308 IPR027417 -
Mepo4g04061 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 86 307 IPR027417 -
Mepo4g04061 669 Pfam ABC-2 type transporter 271 377 IPR043926 GO:0140359
Mepo4g04061 669 Pfam ABC-2 type transporter 399 604 IPR013525 GO:0016020|GO:0140359
Mepo4g04061 669 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 27 661 - -
Mepo4g04061 669 SMART AAA_5 100 291 IPR003593 GO:0016887
Mepo4g04061 669 MobiDBLite consensus disorder prediction 1 35 - -
Mepo4g04061 669 FunFam ABC transporter G family member 22 79 308 - -
Mepo4g04061 669 Pfam ABC transporter 91 242 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04061 Mepo-Chr4 50249291 50257430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04061 71 300 Calmodulin-binding Proteins AT2G36910 28.185 1.21e-15 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04061 K05681 - gmx:100812367 1045.42