Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04055 ATGGATATGGAATCATGTGTACCTCCAGGGTTTAGATTTCATCCAACAGAAGAAGAACTTGTAGGGTATTACCTCAACAGGAAGATTAACTCACTCAAAATTGATCTAGATGTTATTGTTGAGGTTGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGCAACAGAATGAGTGGTACTTTTTCAGCCACAAAGATAAGAAGTATCCTACAGGAACAAGAACTAATAGAGCCACTGCTGCTGGATTCTGGAAAGCTACTGGAAGGGATAAAGCTGTGACTTCCAAAAATAGAATAATAGGAATGAGGAAGACACTTGTCTTTTACAAGGGACGTGCCCCAAATGGAAGGAAAACTGATTGGATCATGCATGAATATAGACATCAAACTTCTGAACATGGTCCTCCACAGGAAGAAGGATGGGTTGTGTGCAGGGCATTTAAAAAGCCAAGTCCAAGTCATAGGCCAGGTTATGAACCATGGTATAGTAATCAACAACAACCACAGTATTTCAGATCAGATGATCAAAACTATGCTACAACAAGACCTTTATCAATTACAGATATTTTGCATGAAAATCGTTTACTCCTTCAAAATCCTGCAGCTGAAGGTACAAGTTTTAGTCACCCCTTTAGCACTGATCAACAGTTTCTATCAAACCAAAGTACTCTTGTTATGGACAACAAACAACTCATTGAACTTCCACAGTTAGATAGTCCAACAACAAGTTTTGCAATCAAAGAAAATACTCATCAAAATGGACTCACAATTGAAGAATATTGCAGTGAAGAAAGGAGCAATAATAATAACAATGGACAAGTAATTGATTGGAAAAGCTTGGACAATTTGTTCACTTCAAATCAATTTACAGATACAGCTAATTACTTTTCAAATCAAAATAGCATGCCATTGATGATACCTCATAGTCAACATGAGCTACAATCTCATCAAAATCAAGCTAATCATATCTTAGGATGCTTTCCTGATTCATAA 1014 0.3669 MDMESCVPPGFRFHPTEEELVGYYLNRKINSLKIDLDVIVEVDLYKIEPWDIQDRCKLGYEQQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVTSKNRIIGMRKTLVFYKGRAPNGRKTDWIMHEYRHQTSEHGPPQEEGWVVCRAFKKPSPSHRPGYEPWYSNQQQPQYFRSDDQNYATTRPLSITDILHENRLLLQNPAAEGTSFSHPFSTDQQFLSNQSTLVMDNKQLIELPQLDSPTTSFAIKENTHQNGLTIEEYCSEERSNNNNNGQVIDWKSLDNLFTSNQFTDTANYFSNQNSMPLMIPHSQHELQSHQNQANHILGCFPDS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04055 337 Gene3D NAC domain 16 159 IPR036093 GO:0003677|GO:0006355
Mepo4g04055 337 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 259 - -
Mepo4g04055 337 FunFam Nac domain-containing protein 86 16 159 - -
Mepo4g04055 337 ProSiteProfiles NAC domain profile. 7 156 IPR003441 GO:0003677|GO:0006355
Mepo4g04055 337 Pfam No apical meristem (NAM) protein 8 134 IPR003441 GO:0003677|GO:0006355
Mepo4g04055 337 SUPERFAMILY NAC domain 5 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04055 Mepo-Chr4 50175964 50177579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04055 3 337 NAC Transcription Factor Family AT1G71930 53.666 2.09e-118 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g04055 NAM 5.7e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04055 - - gmx:100811057 507.294