Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04047 ATGAACATGCTCAGGTATGAATACACAACCACTTTATTACTCTTGTTTTTGTTCTGTCCTATGGTTTTGTCTTTGCTGTCTCAAAACCAAACAAACACCATGAACACTCTCTCCAATCTTCTTAAAATCCCTGGTTGGAATACAAACAATACATGTTCATGGAAAGGTGTCACTTGTGACCTTACCAATTCATCTGTCATTAAGATTGATGTTTCTAAGAACCATCTGAGTTCTATCCCAGATGGGTTTATTTCTGCATGTGGAAAAATTGAGAGTTTAAAGCTTTTAAATTTCAGTGGAAATGTGTTAAGTGGTTTTTTGCCTACTTTTCATGGTTTTCCTGAACTGGAAACACTTGACATGTCTTTCAATAATTTGAGTGGAAGCATTGGTATGCAGTTAGATGGAATGGTCAGTCTTAAGTTTCTGAATCTCAGTAGTAATCAGTTTTCTGGGAACCTTCCTACTAATTTGGGAAGCTCCATGGTTTTGGAGCACCTTGTGCTTTCAAACAATATTTTTAATGGAACAATCCCTGATCAGATTTTGAGTTTCAAAAACTTGACACTGATTGATCTTCAGGTAAATATGCTTTCCGGGCCTATACCTTTAGATATTGGAAATCTTTCCAAATTGGATACTTTGAGTCTTTCCTCTAATAGACTAAGTGGCAAAATCCCAATGTCACTCGTGAATGTCACGAGACTAGTAAGATTTGCAGCTAATCAAAATAATTTTACTGGTGCTGTTCCTCCTGGAATTACAAAATTTCTCCATTATTTGGATCTTAGTTATAATGATTTGTCGGAGTCTATTCCAGAAGGCCTTTTATCTCCATCAAAGCTAGTGCTTGTAGATTTGTCCAATAACGAGTTAACAGGTCATGTGCCTGCAAATATTTCAACTAGTTTAGTCAGGTTGAGATTGGGGAATAATTCCCTCACAGGGGAGGTTCCTTCGGGTGCTTGTGAAGCCGTTCAGGACAACCAATTGACATACATGGAACTGGAAAATAATCAGTTGACAGGTTTGATACCTCCTGAATTAGGTTCATGCAAGAAATTGGCCTTGTTGAATTTGGCTGAGAATCAATTGACCGGTGCATTGCCACCAGAACTTGGTAATCTTAGCAATCTACAAGTCTTGAAGCTTCAAATGAACAAGCTTAATGGTACTATTCCAATTCAGATTTCACAACTTCAAAAATTGTCTACCTTGAATTTAAGCCGTAATTCTCTTGATGGACAAATTCCATCTGATATGTCAAACAACCTTACATTCCTTGATTTGCAAGGGAACAATCTCAGCGGCTCTATACCGTCGTCCATTGGAAACTTGGGAAAACTTATAGAAGTCCAACTTGGAGAAAATAAGTTAAGTGGTGATATTCCAAAAATGCCTTTGAGTCTACAGATTGCATTGAATCTCAGCAGCAATCACTTTAGTGGAGCTATTCCTAGCAGTTTTTCTGATTTGGTTAACCTAGAAATTTTGGACCTCTCTAAAAACAACTTCTCTGGTGACATTCCTCAGTTTCTAACTAAAATGGCTGCATTGACACGGTTGCAACTATCAAACAATCATTTATCAGGTGAGCTTCCACAGTTTCCTCCGTACGTTGTAGTCGATACAAGAGGAAACAATGTCAGAAACAATAGTAATGTCTCACCCAACAATAATCCAAGAGCAGGAAAGAAGGGGAAATCTGTTGTTGCCGCTGTTCTTATTGCAATTGCTGCTGCTATTTTTGTGGTTGGCATGGTCACCCTGCTGGTTGTATTGATCTCACGACACTATTGCAAGGTTAACGATGAACGAGTACAGTCAAGTGAAGGTGAAAATCTTGACCTTCCTCAGGTCATTCAGAGTAATTTGTTAACACCAAATGGAATCCACAGATCAAACATTGATTTGTCCAAGGCCATGGAAGCTGTTTCCGAAACGTCAAACGTAACTCTTAAAACCAAGTTTTCAACTTACTATAAGGCTGTTATGCCATCTGGTTCAATCTACTTCGCCAAGAAGCTGAACTGGTGTGACAAGGTATTTCCAGTGAGTAGTCTTGATAAATTTGGGAAAGAGCTAGATGCATTGGCAAAGTTGAACAATTCAAATGTGATGATTCCTCTAGGCTATATTGTGTCCACTAACAATGCTTATACATTATACGAGTTTCTATCAAATGGCTCTCTCTTCGATGTGCTTCATGGAAGCATGGAAAACTCCTTAGATTGGGCGAGCAGATATAGTATAGCTGTTGGTGTGGCTCAAGGTATGTCTTTCCTGCATGGATTTTCCTCTGGTCCAATACTTCTCCTTGATTTATCAAGTAAAAGTATTATGCTGAAATCACTCAAGGAGCCTCTGGTTGGTGATATTGAACACTACAAGTTGATTGATCCTTCAAAGAGTACCGGGAGTTTTTCTGCAGTTGCTGGTTCTGTTGGCTACATTCCTCCAGAATATGCATACACAATGAGAGTAACAATGGCAGGGAATGTGTATAGCTTTGGAGTCATTCTACTTGAGTTGCTAACAGGCAGACCTGCAGTGACTGAGGGAACTGAATTAGTGAAGTGGGTTTTACGTAATTCAAGAAATCATGATATCATTCTTGATTTGAACGTTAGTAGAACATCACAGGCTGTTAGAAACCAAATGCTTGCAATTCTAGAGATTGCTCTTGTTTGTGTTAGCACATCCTCTGATACAAGACCAAAGATGAAGACTGTGCTACGGATGCTCCTGAATGCCAGATAA 2760 0.3884 MNMLRYEYTTTLLLLFLFCPMVLSLLSQNQTNTMNTLSNLLKIPGWNTNNTCSWKGVTCDLTNSSVIKIDVSKNHLSSIPDGFISACGKIESLKLLNFSGNVLSGFLPTFHGFPELETLDMSFNNLSGSIGMQLDGMVSLKFLNLSSNQFSGNLPTNLGSSMVLEHLVLSNNIFNGTIPDQILSFKNLTLIDLQVNMLSGPIPLDIGNLSKLDTLSLSSNRLSGKIPMSLVNVTRLVRFAANQNNFTGAVPPGITKFLHYLDLSYNDLSESIPEGLLSPSKLVLVDLSNNELTGHVPANISTSLVRLRLGNNSLTGEVPSGACEAVQDNQLTYMELENNQLTGLIPPELGSCKKLALLNLAENQLTGALPPELGNLSNLQVLKLQMNKLNGTIPIQISQLQKLSTLNLSRNSLDGQIPSDMSNNLTFLDLQGNNLSGSIPSSIGNLGKLIEVQLGENKLSGDIPKMPLSLQIALNLSSNHFSGAIPSSFSDLVNLEILDLSKNNFSGDIPQFLTKMAALTRLQLSNNHLSGELPQFPPYVVVDTRGNNVRNNSNVSPNNNPRAGKKGKSVVAAVLIAIAAAIFVVGMVTLLVVLISRHYCKVNDERVQSSEGENLDLPQVIQSNLLTPNGIHRSNIDLSKAMEAVSETSNVTLKTKFSTYYKAVMPSGSIYFAKKLNWCDKVFPVSSLDKFGKELDALAKLNNSNVMIPLGYIVSTNNAYTLYEFLSNGSLFDVLHGSMENSLDWASRYSIAVGVAQGMSFLHGFSSGPILLLDLSSKSIMLKSLKEPLVGDIEHYKLIDPSKSTGSFSAVAGSVGYIPPEYAYTMRVTMAGNVYSFGVILLELLTGRPAVTEGTELVKWVLRNSRNHDIILDLNVSRTSQAVRNQMLAILEIALVCVSTSSDTRPKMKTVLRMLLNAR 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04047 919 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 280 916 - -
Mepo4g04047 919 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 614 725 - -
Mepo4g04047 919 Gene3D Phosphorylase Kinase; domain 1 611 725 - -
Mepo4g04047 919 Pfam Leucine rich repeat 474 529 IPR001611 GO:0005515
Mepo4g04047 919 Pfam Leucine rich repeat 68 126 IPR001611 GO:0005515
Mepo4g04047 919 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 726 919 - -
Mepo4g04047 919 Gene3D Ribonuclease Inhibitor 471 552 IPR032675 -
Mepo4g04047 919 Gene3D Ribonuclease Inhibitor 422 470 IPR032675 -
Mepo4g04047 919 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 301 563 - -
Mepo4g04047 919 SUPERFAMILY L domain-like 34 297 - -
Mepo4g04047 919 Gene3D Transferase(Phosphotransferase) domain 1 726 919 - -
Mepo4g04047 919 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 57 300 - -
Mepo4g04047 919 Pfam Leucine Rich Repeat 424 446 IPR001611 GO:0005515
Mepo4g04047 919 SUPERFAMILY RNI-like 226 549 - -
Mepo4g04047 919 Gene3D Ribonuclease Inhibitor 63 421 IPR032675 -
Mepo4g04047 919 SMART LRR_typ_2 302 325 IPR003591 -
Mepo4g04047 919 SMART LRR_typ_2 137 161 IPR003591 -
Mepo4g04047 919 SMART LRR_typ_2 376 399 IPR003591 -
Mepo4g04047 919 SMART LRR_typ_2 492 516 IPR003591 -
Mepo4g04047 919 SMART LRR_typ_2 400 424 IPR003591 -
Mepo4g04047 919 SMART LRR_typ_2 255 279 IPR003591 -
Mepo4g04047 919 SUPERFAMILY Protein kinase-like (PK-like) 657 915 IPR011009 -
Mepo4g04047 919 Pfam Protein tyrosine and serine/threonine kinase 688 915 IPR001245 GO:0004672|GO:0006468
Mepo4g04047 919 ProSiteProfiles Protein kinase domain profile. 646 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04047 Mepo-Chr4 50057413 50061105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04047 33 919 Receptor kinase-like Gene Family AT2G41820 36.017 1.01e-151 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g04047 PK_Tyr_Ser-Thr 5.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04047 - - gmx:100796647 1179.47