Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04046 ATGGTTTTGTCTTTGCTGTCTCAAAACCAAACAAACACCATGAACACTCTCTCCAATCTTCTTAAAATCCCTGGTTGGAATACAAACAATACATGTTCATGGAAAGGTGTCACTTGTGACCTTACCAATTCATCTGTCATTAAGATTGATGTTTCTAAGAACCATCTGAGCTCTATCCCAGATGGGTTTATTTCTGCATGTGGAAAAATTGAGAGTTTAAAGCTTTTAAATATCAGTGGAAATGTGTTAAGTGGTTTTTTGCCTACTTTTCATGGTTTTCCTGAACTGGAAACACTTGACATGTCTTTCAATCATTTGAGTGGAAGCATTGATATGCAGTTAGATGGAATGGTCAGTCTTAAGTTTCTGAATCTCAGCAGTAATCAGTTTTCTGGGAACCTTCCTACTAATTTGGGAAGCTCCATGGTTTTGGAGCACCTTGTGCTTTCAAACAATAATTTTAATGGAACAATCCCTGATCAGATTTTGAGTTTCAAAAACTTGACACTGATTGATCTTCAGGTAAATATACTTTCCGGGCCTATACCTTTAGATATTGGAAATCTTTCCAAATTGGATACTTTGAGTCTTTCTGCTAATAAACTAAGTGGCAAAATCCCAATGTCACTCGTGAATGTCACGACACTAGTAAGATTTGCAGCTAATCTAAATAATTTTACTGGTGCTGTTCCTCCTGGAATTACAAAATTTCTCCATTATTTGGATCTTAGTTATAATCATTTGTCGGAGTCTATTCCAGAAGGCCTTTTATCTCCATCACAGCTAGTGCTTGTAGATTTGTCCAATAACAAGTTAACAGGTCATGTGCCTGCAAATATTTCAACTAGTTTAGTCAGGTTGAGATTGGGGAATAATTCCCTCACAGGGGAGGTTCCTTCGGGTGCTTGTGAAGCCGATCATGACAACCAATTGACATACATGGAACTGGAAAATAATCAGTTGACAGGTTTGATACCTCCTGAATTAGGTTCATGCAAGAAATTGGCCTTGTTGAATTTGGCTGAGAATCAATTGACTGGTGCATTGCCACCAGAACTTGGTAATCTTGGCAATCTACAAGTCTTCAAGCTTCAAATGAACAAGCTTAATGGTACTATTCCAATTCAGATTTCACAACTTCAAAAATTGTCTACCTTGAATTTAAGCCGTAATTCTCTTGATGGACCAATTCCATCTGATATGTCAAACAACCTTACATTCCTTGACTTGCAAGGGAACAAACTCAACGGCTCTATACCGTCGTCCATTGGAAACTTGATAAAACTTATAGAAGTCCAACTTGGAGAAAATAAGTTAAGCGGTGATATTCCAAAAATGCCTTTGTATCTACTGATTGCATTGAATCTCAGCAGCAATCACTTTGGTGGATCTATTCCTAGTAGTTTTGCTGATTTGTTTAACCTAGAAATTTTGGACCTGTCCAAAAACAACTTCTCCGGTGACATTCCTCCGTCTCTAACTAAAATGGCTGCATTGACACAGTTGCAACTATCAAACAATCATTTATCAGGTGAGCTTCCACAGTTTCCTCCGTACGTTGTAGTTGATACAAGAGGAAACAATGTCAGAAACAATAGTAATGTCTCACCCAACAATAATCCTAGAGCAGGAAAGAAGGGGAAATCTGTTGTTGCCGCTGTTCTTGTTGCAATTGCTGCTGCTATTTTTGTGGTTGGCATGGTCACCCTGTTGGTTGTATTGATCTCACGACACTATTGCAAGATTAACGATGAACGGGTACAGTCAAGTGAAGGTGAAAATTTTGACCTTCCTCAGGTCATCCACAGTAATTTGTTAACTCCAAATGGAATTCATAGATCAAACATTGATTTCTCCAAGGTCATGGAAGTTGTTGCCAAAACGTCAAACTTAACTCTAAAAACCAAGTTTTCAACTTACTATAAGGCTGTTATGCCATCTGGTTCGATCTACTTCGCCAAGAAGCTGAACTGGTGTGACAAGGTATTTCCAGTGAGTAGTCTTGATAAATTTGGGAAAGAGCTAGATGCACTGGCAAAGTTGAACAATTCAAATGTGATGATTCCTCTAGGCTATATTGTGTCCACTAACAATGCTTATACATTATACGAGTTTCTCTCGAACGGCTCTCTCTTCGATGTGCTTCATGGACGCATGGAAAAGTCTTTAGATTGGGCTAGCAGATATAGTATAGCTGTTGGTGTGGCTCAGGGCCTAGATTTTCTGCATGGTTGTGCCTCTGGTCCAATACTTCTCCTTGATCTATCAAGTAAAAGTATTATGCTGAAATCGTTTGAGGATCCTCTAGTTGGTGATATTGAACACTGCAAGATGATTGATCCTTCAAAGAGTACCGAGAGTTTTTCTGCTGTTGCTGGTTCTGATGGCTACATTCCTCCAGAGTATGTGTGCACAATGAGAGAGAATGTGTATAGCTTTGGGGTGATTCTACTGGAATTGCTGACTGGAAAACCCGCAGTGACTAAGGGAGCTGAATTGGTAAAGTGGGTTTTGCGTAATTCAAGAAATCAAGATTACATTCTTGATTTGAATGTTTGCAGAACATCACAATCTGTTAGAAACCAAATGCTTGAAATTTTGGAGATTGCTCTTGTTTGTGTAAGCCCATCCCCTGATGCAAGACCAAAGATGAAGACTGTGCTAAGAATGTTGCTGAATGCCAGATAA 2688 0.3891 MVLSLLSQNQTNTMNTLSNLLKIPGWNTNNTCSWKGVTCDLTNSSVIKIDVSKNHLSSIPDGFISACGKIESLKLLNISGNVLSGFLPTFHGFPELETLDMSFNHLSGSIDMQLDGMVSLKFLNLSSNQFSGNLPTNLGSSMVLEHLVLSNNNFNGTIPDQILSFKNLTLIDLQVNILSGPIPLDIGNLSKLDTLSLSANKLSGKIPMSLVNVTTLVRFAANLNNFTGAVPPGITKFLHYLDLSYNHLSESIPEGLLSPSQLVLVDLSNNKLTGHVPANISTSLVRLRLGNNSLTGEVPSGACEADHDNQLTYMELENNQLTGLIPPELGSCKKLALLNLAENQLTGALPPELGNLGNLQVFKLQMNKLNGTIPIQISQLQKLSTLNLSRNSLDGPIPSDMSNNLTFLDLQGNKLNGSIPSSIGNLIKLIEVQLGENKLSGDIPKMPLYLLIALNLSSNHFGGSIPSSFADLFNLEILDLSKNNFSGDIPPSLTKMAALTQLQLSNNHLSGELPQFPPYVVVDTRGNNVRNNSNVSPNNNPRAGKKGKSVVAAVLVAIAAAIFVVGMVTLLVVLISRHYCKINDERVQSSEGENFDLPQVIHSNLLTPNGIHRSNIDFSKVMEVVAKTSNLTLKTKFSTYYKAVMPSGSIYFAKKLNWCDKVFPVSSLDKFGKELDALAKLNNSNVMIPLGYIVSTNNAYTLYEFLSNGSLFDVLHGRMEKSLDWASRYSIAVGVAQGLDFLHGCASGPILLLDLSSKSIMLKSFEDPLVGDIEHCKMIDPSKSTESFSAVAGSDGYIPPEYVCTMRENVYSFGVILLELLTGKPAVTKGAELVKWVLRNSRNQDYILDLNVCRTSQSVRNQMLEILEIALVCVSPSPDARPKMKTVLRMLLNAR 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04046 895 Gene3D Ribonuclease Inhibitor 42 401 IPR032675 -
Mepo4g04046 895 Gene3D Ribonuclease Inhibitor 402 543 IPR032675 -
Mepo4g04046 895 Gene3D Transferase(Phosphotransferase) domain 1 706 895 - -
Mepo4g04046 895 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 594 705 - -
Mepo4g04046 895 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 37 280 - -
Mepo4g04046 895 Gene3D Phosphorylase Kinase; domain 1 610 705 - -
Mepo4g04046 895 SMART LRR_typ_2 448 471 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 117 141 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 472 496 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 235 259 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 93 116 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 380 404 IPR003591 -
Mepo4g04046 895 SMART LRR_typ_2 282 305 IPR003591 -
Mepo4g04046 895 SUPERFAMILY L domain-like 14 278 - -
Mepo4g04046 895 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 281 542 - -
Mepo4g04046 895 ProSiteProfiles Protein kinase domain profile. 626 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04046 895 SUPERFAMILY L domain-like 281 516 - -
Mepo4g04046 895 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 706 895 - -
Mepo4g04046 895 SUPERFAMILY Protein kinase-like (PK-like) 637 891 IPR011009 -
Mepo4g04046 895 Pfam Protein kinase domain 637 889 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo4g04046 895 Pfam Leucine rich repeat 454 509 IPR001611 GO:0005515
Mepo4g04046 895 Pfam Leucine rich repeat 48 106 IPR001611 GO:0005515
Mepo4g04046 895 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 166 891 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04046 Mepo-Chr4 50047709 50050763 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04046 13 895 Receptor kinase-like Gene Family AT2G41820 35.333 1.60e-142 443
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo4g04046 Pkinase 2.6e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04046 - - gmx:100796647 1106.66