Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04040 ATGATGAGTACTAATACAAACTCCTATGAAGGCTATGAAGGAAAAATCTTTCATCTTCTTCAAATGAGAGAACAAATGCTAAGAAAAAGCACTCTCAACATTGAAGATTCAAATGGTCTTCCATTAATTCATTTACTTCTCACAACATCAACTTCTGTTGATGAAAACAACTTGGATTCATCTCTTGAAAACCTAACAGATCTTTACCAAACAGTTTCACTCACCGGTGATTCGGTTCAACGTGTCGTCGCATATTTCACCGATGGTTTAACTGCAAAACTCCTCACAAGAAAATCACCATTCTATGAAATGTTGATGGAAGAACCAACAATCGACGAAGAGTTTCTCGCATTCACAGATCTCTACAGAGTTTCACCCTATTTCCAATTTGCTCATTTCACTGCAAATCAAGCTATCTTGGAAGCCTTTGAAAAAGAAGAAGAGAAAAATAACCGTTCTATTCATGTTATTGATTTTGATGTTTCATATGGTTTTCAATGGCCTTCACTGATTCAATCACTTTCAGAAAAAGCAACAAGTAGCAACAGAATCTCTTTCAGATTAACTGGTTTCGGTAAGAATTTAAAAGAGCTTCAAGAAACTGAATCTAGGTTAGTTAGTTTCTCAAAAGGTTTTGGTAACATTGTTTTTGAGTTTCAAGGTTTGTTAAGAGGATCAAGAGTAATTAATTTAAGGAAGAAGAAAAATGAAACTGTGGCGGTTAATTTAGTTTCCTATTTAAACAAAATGAGTTGTTTATTGAAAATAACTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCCATTGTTGTGGTTGTTGAACAAGAAGGTAGTAAAAATCCTAGTAGAACCTTCTTATCAAGATTCACAGACACATTGCATTATTTTGCAGCTATGTTTGATTCACTTGATGATTGTTTACCACTTGAGAGTATTGAAAGGTTAAGAATTGAGAAGAAGGTTTTTGGTAAAGAGATTAAAAGCATGCTTAATAACTATGATGATGTGGATGGTGGTGTTGATTGTGCAAAATATGAAAAGATGGAAACATGGAAAAGTAGAATGGAGAATCATGGATTTGTTAGTATGAAAATGAGTTCAAAATGTTTGATACAAGCAAAATTGTTGCTTAAGATGAGGACACATTATTGTCCACTTCAATTTGAAGAAGAAGGTGGTGGTGGTGGTTTCAGGGTTTCAGAAAGAGATGATGGAAGGGCTATCTCTTTAGGATGGCAAAATAGGTTTTTGCTTACTGTGTCAGCATGGCAATCACTTTGA 1284 0.3442 MMSTNTNSYEGYEGKIFHLLQMREQMLRKSTLNIEDSNGLPLIHLLLTTSTSVDENNLDSSLENLTDLYQTVSLTGDSVQRVVAYFTDGLTAKLLTRKSPFYEMLMEEPTIDEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEKEEEKNNRSIHVIDFDVSYGFQWPSLIQSLSEKATSSNRISFRLTGFGKNLKELQETESRLVSFSKGFGNIVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNKMSCLLKITDTLGFVHSLNPSIVVVVEQEGSKNPSRTFLSRFTDTLHYFAAMFDSLDDCLPLESIERLRIEKKVFGKEIKSMLNNYDDVDGGVDCAKYEKMETWKSRMENHGFVSMKMSSKCLIQAKLLLKMRTHYCPLQFEEEGGGGGFRVSERDDGRAISLGWQNRFLLTVSAWQSL 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04040 427 Pfam GRAS domain family 42 425 IPR005202 -
Mepo4g04040 427 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 38 420 IPR005202 -
Mepo4g04040 427 ProSiteProfiles GRAS family profile. 33 425 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04040 Mepo-Chr4 49992751 49994034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04040 19 424 GRAS Transcription Factor Family AT3G54220 33.890 4.18e-54 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo4g04040 GRAS 5.4e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04040 - - gmx:100809458 713.375