Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04037 ATGTCTGGTAATTCAAGTTGCACCGTTTACATAGGCAATCTGGATGAGAGGGTGACAGACAGGATATTGTATGATATATTAATTCAGGCTGGACGTGTGGTAGACTTGCACATTCCTAAAGATAAGGAATCTGAAAAACCAAAAGGTTTTGCCTTTGCAGAATATGAAACTGAGGAGATTGCAGACTATGCTGTCAGACTTTTCTCAGGCCTTGTAACTCTGTACAAACGAACCCTGAAGTTTGCGATATCTGGAAGGGACAAAAATACCCCAAATAGTTCTACAGCTACTACACCCTCGTCAAATTCTTCTCAACGACCAAGGCCTTACCCTGTGCAAATAAATAGTTCAGAAAATTTTCAGCATTCCGCTAGGCAATCAATACCTGATCGATTCTCAGATCGTGTGTTAAATTATTCTCAAGTTCCTCCTTCTCATCATCGTGCAACTGACCAATCTAATGTGTATGGATCTCACTTTGGTGGCAACCATTTGGACTACAGTCAGAGAGCTTTTGGGGAGGAATTGATTAACGCTAGCCGATCTAGGTCACGCCGCCCTGATGGAGTTAGCCCAATCTCTTATCCACCTTACTAA 597 0.4221 MSGNSSCTVYIGNLDERVTDRILYDILIQAGRVVDLHIPKDKESEKPKGFAFAEYETEEIADYAVRLFSGLVTLYKRTLKFAISGRDKNTPNSSTATTPSSNSSQRPRPYPVQINSSENFQHSARQSIPDRFSDRVLNYSQVPPSHHRATDQSNVYGSHFGGNHLDYSQRAFGEELINASRSRSRRPDGVSPISYPPY 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04037 198 SMART rrm1_1 8 82 IPR000504 GO:0003723
Mepo4g04037 198 PANTHER RNA BINDING MOTIF RBM PROTEIN -RELATED 1 195 - -
Mepo4g04037 198 MobiDBLite consensus disorder prediction 178 198 - -
Mepo4g04037 198 Gene3D - 2 96 IPR012677 -
Mepo4g04037 198 MobiDBLite consensus disorder prediction 85 125 - -
Mepo4g04037 198 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 79 IPR000504 GO:0003723
Mepo4g04037 198 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 7 86 IPR000504 GO:0003723
Mepo4g04037 198 SUPERFAMILY RNA-binding domain, RBD 4 80 IPR035979 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04037 5 87 Eukaryotic Initiation Factors Gene Family AT1G49760 28.916 3.29e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g04037 K12831 - gmx:100803118 302.753