Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g04026 ATGGAACACATAATGAAAACCACTTCTTCTCCTCCTCATCTACCAATCCCGATTCATGTTCCCATTCTCACCATGCTATCAAACTCCACACCATCTTCATCTTCTTCCCCTCCTTTACAATCTCCCACACCTTTCCCTTCACCAGCTTCTCAATATTCTCCTCCCTCTGCCGCTCCTCAACCACCATCTCCTCCACCACCAATTATTGTTAGCCCTTGTGCTGCCTGTAAGATTCTCCGTCGCAGGTGTGTTGAAAAGTGTGTGTTAGCTCCGTATTTTCCTCCAACTGATCCACTCAAGTTCACCATTGCTCATAGAGTCTTTGGAGCTAGCAACATCATTAAGTTCTTGCAGGAACTACCTGAACCTCAGAGAGCAGATGCAGTGAGCAGCATGGTTTATGAAGCAAATGCAAGGATAAGGGACCCAGTTTATGGGTGTGCAGGTGCAATATGTCAACTTCAAAAACAAGTTAGTGAGTTACAAACACAGCTAGCCAAAGCACAAGCTGAGTTAGTGAACATGCATTGCCAACAAGCAAATTTAGTGGCACTAATTTGCATGGAAATGAGTACTCAGTCATCACCAGACCATGACATGATAATTAATCAGCCTCAACCTCATGTTGATATGAGTTGCTTTTTAGAGGACAACAATTTTGGGTCTGCTTGGGAGCCTCTTTGGACATGA 690 0.442 MEHIMKTTSSPPHLPIPIHVPILTMLSNSTPSSSSSPPLQSPTPFPSPASQYSPPSAAPQPPSPPPPIIVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPEPQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQTQLAKAQAELVNMHCQQANLVALICMEMSTQSSPDHDMIINQPQPHVDMSCFLEDNNFGSAWEPLWT 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g04026 229 MobiDBLite consensus disorder prediction 27 64 - -
Mepo4g04026 229 MobiDBLite consensus disorder prediction 37 64 - -
Mepo4g04026 229 ProSiteProfiles LOB domain profile. 71 172 IPR004883 -
Mepo4g04026 229 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 71 191 - -
Mepo4g04026 229 Coils Coil 151 178 - -
Mepo4g04026 229 Pfam Lateral organ boundaries (LOB) domain 72 169 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g04026 Mepo-Chr4 49825924 49827853 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g04026 68 229 AS2 family AT1G07900 68.072 8.64e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo4g04026 LOB 6.9e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g04026 4 49825924 49827853 Mepo4g04026 4 49825924 49827853 ECH