Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03994 ATGTGGCAAGACATGCTATGCTTGACATTCCACCAAGAAAACAGTTGTTGTATCTTTCTGGGGTATGAATATGAAGGTAAGGATGCTTCAATGTTTGCTTTGAGCTTTGGTTCAATTCCATCGTCCAACAGTAGAAGCAGATCAGTGCACAGTGATTGTGTTCCACTTTATTACATAACCTCAAACCCCTCTTTGGAGGTTGAGGAGCATAGTAGTATTGCCCTCGAATATATGATGGTTGTAAGAGTTTCTGATGGTGAGGCTTATATATCTACTTTCAATGAGGAAGCTGAGAAGATCATCGGGTGCTCTACCGATGAGCTAGACAACCTTAGATCACAGGAGGGAGAATCCTTAAAAAATGAAATTGAAGCAAACTACTTGGATTCCACACCTCTTGCGGTTGCATTCAAAGATGGTCTTTCTTCAACTGCATATCTTATGATCCATCTCGATGATTAA 462 0.4048 MWQDMLCLTFHQENSCCIFLGYEYEGKDASMFALSFGSIPSSNSRSRSVHSDCVPLYYITSNPSLEVEEHSSIALEYMMVVRVSDGEAYISTFNEEAEKIIGCSTDELDNLRSQEGESLKNEIEANYLDSTPLAVAFKDGLSSTAYLMIHLDD 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03994 153 Gene3D - 65 138 IPR012340 -
Mepo4g03994 153 Coils Coil 94 114 - -
Mepo4g03994 153 SUPERFAMILY Nucleic acid-binding proteins 75 125 IPR012340 -
Mepo4g03994 153 Pfam Replication factor-A C terminal domain 70 130 IPR013955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03994 Mepo-Chr4 49490966 49492773 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03994 22 146 Core DNA Replication Machinery Family AT5G08020 33.333 1.24e-18 79.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03994 K07466 - egt:105962674 82.4185