Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo4g03992 | ATGACTACCACGGCGGAATCAGAACTAAAAATATACTGGTGCCATGAATGTGACATGAGCGTGTCTCTCATTTCTTCTCTTCTACTATGTCCCCATTGTCACACCAACTCCCTTGAACCCATGGACTCTCCTTTTCCCCAAAACAACGTGGAAATGCTTCTCCATTCTTCCCGCTTCAACGATTTTTTTGAAGAAGCCCTTTCACTATTCTCACCCCCTCCCCCCAAAACTCACACCGAAACAATCACCCCTACAATAATCGTCACCCCATCACTCCTCTCTGGCGTTGTTTTATGCGCCGTTTGTACTGAAGAAATTTCCGTTGATGAAGAAGCCAAACAGCTACCATGCAATCATCTCTACCACTCAGGTTGCATTATTCCGTGGCTCCATCGCCGATCTTCTTGCCCTATGTGCCGCTTCCAAATCAACGACAATGACGTAGATGACAAAGAAGATGAAGATGTTGATGTTGTTGCTGTCATGAGGCGGATGGTGCCGCGACTGTCGGAGCTGTCGGAGGATGATGGTTTCTATGGACTGAGAATTACTATCAACAACGTTGCTTCCCGTCGTCACGATCTCCATGCTTCCGTCACCGGCGAGAATTCTGCTACAGATAGTGAACCCGATGATGGTGGTGTAATTGGAGAATATTGA | 660 | 0.4697 | MTTTAESELKIYWCHECDMSVSLISSLLLCPHCHTNSLEPMDSPFPQNNVEMLLHSSRFNDFFEEALSLFSPPPPKTHTETITPTIIVTPSLLSGVVLCAVCTEEISVDEEAKQLPCNHLYHSGCIIPWLHRRSSCPMCRFQINDNDVDDKEDEDVDVVAVMRRMVPRLSELSEDDGFYGLRITINNVASRRHDLHASVTGENSATDSEPDDGGVIGEY | 219 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo4g03992 | 219 | ProSiteProfiles | Zinc finger RING-type profile. | 99 | 140 | IPR001841 | - | |
Mepo4g03992 | 219 | SMART | ring_2 | 99 | 139 | IPR001841 | - | |
Mepo4g03992 | 219 | SUPERFAMILY | RING/U-box | 92 | 145 | - | - | |
Mepo4g03992 | 219 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 58 | 143 | - | - | |
Mepo4g03992 | 219 | CDD | RING-H2_PA-TM-RING | 99 | 140 | - | - | |
Mepo4g03992 | 219 | Pfam | Ring finger domain | 99 | 140 | IPR001841 | - | |
Mepo4g03992 | 219 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 94 | 158 | IPR013083 | - | |
Mepo4g03992 | 219 | Pfam | zinc-ribbon | 12 | 36 | IPR039525 | GO:0061630 | |
Mepo4g03992 | 219 | MobiDBLite | consensus disorder prediction | 196 | 219 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo4g03992 | Mepo-Chr4 | 49478225 | 49478884 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo4g03992 | 3 | 157 | C3H Transcription Factor Family | AT1G68180 | 29.947 | 1.62e-18 | 79.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo4g03992 | K11982 | - | gmx:100775530 | 169.474 |