Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03974 ATGTTTAGTAGTTGGAGATGTCTTGTTTGGTTGGTTTTGACATTGAGCTTGTTGTTGTTTGGGAAGAAGATGCATTGTCAAGAAATGAATGACTATGATAACCCTGCTGTACTTCCTCTTATTACTCAGCTTGTTTATACAAGAATTTCCAATTTGACTTCAATTCTCAGTCAACAAATTAGTAAAGACTCCAATTTTTGTGTCAAAGATCCGGATTCTGATTGGAATCAAGCCTTTAATTTTTCATCAGATTTGCACTTCTTGTCATCTTGCATTAAAACGACGAAAGGAGATATTTCAAACCGCTTGTGTACAGCCGCAGAAGTGAAGTTTTACTTAAATAGTTTAATGGAGAAATCTTCAAGTGCCAATTATTTAAAGCCTAACAAGAACTGTAATTTAACCTCATGGGTTTCTGGTTGTGAGCCTGGATGGGCATGTCGTGTTCCCTCAAGCCAGAAGGTTGACCTTAAAGATTCAAAGGAGATGCCGGCTAGAACTTCAAACTGTCGAGCATGTTGTGAAGGCTTCTTTTGTCCTCACGGTATCACATGCATGATACCATGCCCTCTAGGCTCATATTGCCCCATTGCTACACTCAATAAAACGACTGGCGTATGTGAACCATATCTTTATCAACTACCTCCCAAGCAGCCAAATCATACATGCGGAGGAGCAAATGTTTGGTCTGATTTTAGTAGCAGTGGTGAAACATTTTGCTCAGCTGGATCTTATTGTCCAACAACCACCACGAAATTTCCGTGCAGTAGTGGGCATTACTGCAGGACGGGTTCCACATCTGAGAAAAGATGTTTCAAGCTGAGTTCATGTAATTCAAACACAGCAACCCAAAACATGCATGCATATGGAGTTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTAACTACTAGGGAAAGGAGAGTGGCAAAATCAAGAGAATCAGCAGCTAGAAGTGCAAGGAAAACTGCAAATGCACACCAAAGATGGAAAGTTGCAAAAGATGCTGCTAAGAAAGGTGCAACTGGGTTGCAAGCTCAATTATCACGCAAGTTCTCTCGTAAAAAGGACGAAGAAAATCTTGAAAAAGTTAAAATTTTGAATCAAGAGACTTCTGAAACAGATGTTGAATTGTTGCCGCATTCACAACCTTCAAACATGGTTGCAAGTTCATCTGCAGTGCCAACTGAAAAGGGGAAAAATCCAAGTGGACTAATGCACATGATGCATGAAATCGAAAATGACCCGTATGTTAACAATAATCCAAATACAGGAAAAGAAACTAGACATAAAAGTGCTACAAAGGAAAAACAGCCACAAACTAACACACAAATTTTTAAGTATGCATATGCTCAGCTTGAAAAAGAGAAGGCTCAGCAACAAGAAAACAAGAACCTTACCTTCTCAGGAGTACTAAAAATGGCGACAAATACTGAGAAAAGTAAGAGGCCTTTTATTGAGATTTCATTCAGAGATCTGACTCTCACACTTAAAGCTCAAAACAAACATATATTGAGAAATGTTACCGGGAAAATCAAACCTGGTCGTATCACCGCTATCATGGGCCCGTCAGGGGCTGGCAAGACAACATTTCTTTCAGCTCTAGCTGGAAAAGCATTTGGATGCTTGGTTACTGGTTCAATTCTGATAAATGGAAGGAATGAATCAATTCACTCCTTCAAGAAAATTATTGGCTTTGTGCCACAAGATGATGTAGTTCATGGAAACTTGACTGTGGAAGAAAATCTCTGGTTCAGTGCACAGTGCAGGCTATCAGCTGATTTGTCGAAACCAGAAAAAGTTTTGGTTGTTGAAAGAGTTATTGAATTTTTGGGGCTTCAATCTGTGAGGAATTCCGTGGTTGGAACCGTGGAAAAGCGAGGGGTCTCTGGAGGCCAAAGGAAGCGGGTAAATGTTGGATTGGAAATGGTTATGGAACCTTCGCTTTTGATGCTAGATGAACCAACATCTGGCCTGGATAGTGCATCATCTCAGCTCCTTCTAAGAGCACTAAGACGTGAAGCTCTTGAGGGAGTGAACATTTGCATGGTGGTTCATCAACCAAGCTATGCTTTGTTCAACATGTTTGATGACTTGATACTTCTGGGTAAAGGTGGTCTCATGGTCTATCACGGATCTGCCAAGAAAGTTGAAGAATACTTTTCAGGTCTCGGGATCAATGTTCCGGAGAGGATCAACCCTCCAGATTACTATATTGACATTTTGGAGGGCATTGCAGCACCTGGTGGAAGCTCAGGCCTCACTTATCAAGATCTTCCAGTTAAATGGATGCTTTATAATGAATATCCAATACCTCTTGATATGAGACAGCATGCAGCACAGTTTGGTATACCGCAGAGTGTAAATTCAGCTAATGACTTGGGGGAAGTGGGAAAGACGTTTGCCGGAGAATTATGGAATGACGTAAGAAGCAATGTGGAACTGCGAGGGGAAAAGATAAGACTTAATTTTTTAAAATCCAAGGATTTATCCAACCGGAAAACTCCTGGTGTATTCAAGCAATATAAGTACTTTCTTATACGGGTTGGGAAGCAGCGATTACGAGAAGCCCGGATCCAGGCCGTAGATTATCTTATTTTGCTACTTGCTGGAGCCTGCTTAGGATCAATTACCAAATCGAGTGATCAAACATTTGGTGCATCTGGTTACACCTATACGGTGATTGCTGTATCTCTTCTATGCAAAATAGCGGCCTTGAGATCATTTTCTCTGGATAAACTGCACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTAGCTTATTTTCTCTCGAAAGACACGATGGATCATTTTAATACAGTGATCAAACCTGTGGTGTACCTATCTATGTTCTATTTCTTAACCAATCCAAGATCTACTTTCACAGATAACTATATTGTGCTGCTCTGTCTTGTATACTGTGTAACTGGCATAGCATATGCATTATCCATAGTTTTTGAACCTGGCGCAGCGCAGCTGTGGTCAGTACTTCTTCCAGTTGTTTCGACTCTCATTGCAACACAACAAAAGGATGGTAAAATTTTAAAGGCTATAGCTAATTTATGCTACTCTAAGTGGGCTTTACAAGCATTGGTCATTGCAAATGCTGAAAGGTATCAAGGAGTGTGGCTCATAACTCGTTGCGGTTCACTTTTAAAAAGCGGTTATAATCTTCATGATTGGAGTCTCTGCATATCCATTCTCATTCTTATGGGTGTAATTGGCCGCGCAATTGCGTTTTTCTGTATGGTCACCTTCAAAAAGAAGTAA 3303 0.4054 MFSSWRCLVWLVLTLSLLLFGKKMHCQEMNDYDNPAVLPLITQLVYTRISNLTSILSQQISKDSNFCVKDPDSDWNQAFNFSSDLHFLSSCIKTTKGDISNRLCTAAEVKFYLNSLMEKSSSANYLKPNKNCNLTSWVSGCEPGWACRVPSSQKVDLKDSKEMPARTSNCRACCEGFFCPHGITCMIPCPLGSYCPIATLNKTTGVCEPYLYQLPPKQPNHTCGGANVWSDFSSSGETFCSAGSYCPTTTTKFPCSSGHYCRTGSTSEKRCFKLSSCNSNTATQNMHAYGVMLIAALSTLLLIIYNCSDQVLTTRERRVAKSRESAARSARKTANAHQRWKVAKDAAKKGATGLQAQLSRKFSRKKDEENLEKVKILNQETSETDVELLPHSQPSNMVASSSAVPTEKGKNPSGLMHMMHEIENDPYVNNNPNTGKETRHKSATKEKQPQTNTQIFKYAYAQLEKEKAQQQENKNLTFSGVLKMATNTEKSKRPFIEISFRDLTLTLKAQNKHILRNVTGKIKPGRITAIMGPSGAGKTTFLSALAGKAFGCLVTGSILINGRNESIHSFKKIIGFVPQDDVVHGNLTVEENLWFSAQCRLSADLSKPEKVLVVERVIEFLGLQSVRNSVVGTVEKRGVSGGQRKRVNVGLEMVMEPSLLMLDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYALFNMFDDLILLGKGGLMVYHGSAKKVEEYFSGLGINVPERINPPDYYIDILEGIAAPGGSSGLTYQDLPVKWMLYNEYPIPLDMRQHAAQFGIPQSVNSANDLGEVGKTFAGELWNDVRSNVELRGEKIRLNFLKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAVDYLILLLAGACLGSITKSSDQTFGASGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTMDHFNTVIKPVVYLSMFYFLTNPRSTFTDNYIVLLCLVYCVTGIAYALSIVFEPGAAQLWSVLLPVVSTLIATQQKDGKILKAIANLCYSKWALQALVIANAERYQGVWLITRCGSLLKSGYNLHDWSLCISILILMGVIGRAIAFFCMVTFKKK 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03974 1100 Pfam ABC transporter 515 667 IPR003439 GO:0005524
Mepo4g03974 1100 Pfam ABC-2 type transporter 696 1100 IPR043926 GO:0140359
Mepo4g03974 1100 SMART AAA_5 524 716 IPR003593 GO:0016887
Mepo4g03974 1100 FunFam ABC transporter G family member 24 492 734 - -
Mepo4g03974 1100 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 498 739 IPR003439 GO:0005524
Mepo4g03974 1100 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 243 1087 - -
Mepo4g03974 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 498 731 IPR027417 -
Mepo4g03974 1100 CDD ABCG_EPDR 496 722 - -
Mepo4g03974 1100 MobiDBLite consensus disorder prediction 425 453 - -
Mepo4g03974 1100 ProSitePatterns ABC transporters family signature. 639 653 IPR017871 GO:0005524|GO:0016887
Mepo4g03974 1100 Gene3D - 496 733 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03974 Mepo-Chr4 49237973 49245599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03974 514 717 Calmodulin-binding Proteins AT2G36910 27.232 4.09e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03974 - - gmx:100775464 1834.31