LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo4g03970	ATGAATAACTCAGTGGCTTCAGAGAACAGTTTTATTATTGAAAGTGATGAAGAAGATGATAAGGATTTTAACAAAGGTGATGATGGAAACGATTCTGATTCTTCCAATTACTCAAATGAAAATCCACCACAGAGGAAACAAAGTTCTTATAACCCTTCATGGCCTCAGAGTTACAGGCAATCTATTGATCTATACAGTAGTGTGCCATCACCAAGTATTGGATTTCTGGGAAATTCTTCCCTTACAAGATTAAGCAGTTCCTTCCTTTCTACATCTCTAACAAGGAGGCACACTCCGGAAGTACTTCCTTCAGTCACAAAACCTCTGATACAACCAACAGAAGAGGAGAAGCACCAAAGACGCAGCTCTCACACCTTGCTTCCTCCCCTATCTAGAAGGTCTTCTTTGCTTAAGAAAGAATCCAAGGTTTCTCATGAAGTTCCTTCTCGCCACTGCTCTTTTGGACAGGCTGTGCTTAATGGCATAAATGTCCTTTGTGGAGTAGGAATCCTTTCAACCCCTTATGCTGCTAAAGAAGGTGGATGGGTAGGACTTTCCATATTATTCATTTTTGGAATTCTTTCCTTTTATACTGGATTGCTCTTGCGTTCCTGCCTGGACAGTGAACCTGGTCTTGAAACATACCCTGATATTGGCCAAGCTGCTTTTGGTACTGCCGGACGAATTGCTATTTCAATAGTATTATACGTCGAATTATATGGCTGTTGTATTGAATATATAATTTTGGAGGGAGACAACTTGGCTTCCTTGTTTCCAAACGCATACTTAAATTTAGGTGGAATTGAATTGAATCCACAAACATTGTTTGCTGTGATTGCAGCCTTGGCTGTTCTTCCTACAGTTTGGCTCCGCGACTTAAGCGTTCTTAGTTACATCTCAGCTGGTGGAGTTATTGCATCAGTTTTAGTGGTTCTGTGCTTGTTATGGATTGGCATAGAAGATGTCGGCTTTCAACGCTCAGGGACAACACTGAATCTTGGAACTCTTCCTGTTGCTATTGGTCTTTATGGTTACTGTTATTCTGGACATGCTGTGTTCCCAAATATTTACACATCAATGGCAAAACCAAACCAATTCCCTGCAGTACTAGTAGCATGTTTTGGAGTTTGTACCTTGCTATATGCTGGTGGTGCTGTTATGGGATACAAAATGTTTGGAGAAGATACACTCTCTCAATTCACCCTTAACCTGCCTCAAGACTTGGTTGCAACCAAGATTGCTGTCTGGACTACGGTGGTTAATCCATTTACCAAATATCCTTTATATGCATGCGTGCATTTAGATTGA	1308	0.4083	MNNSVASENSFIIESDEEDDKDFNKGDDGNDSDSSNYSNENPPQRKQSSYNPSWPQSYRQSIDLYSSVPSPSIGFLGNSSLTRLSSSFLSTSLTRRHTPEVLPSVTKPLIQPTEEEKHQRRSSHTLLPPLSRRSSLLKKESKVSHEVPSRHCSFGQAVLNGINVLCGVGILSTPYAAKEGGWVGLSILFIFGILSFYTGLLLRSCLDSEPGLETYPDIGQAAFGTAGRIAISIVLYVELYGCCIEYIILEGDNLASLFPNAYLNLGGIELNPQTLFAVIAALAVLPTVWLRDLSVLSYISAGGVIASVLVVLCLLWIGIEDVGFQRSGTTLNLGTLPVAIGLYGYCYSGHAVFPNIYTSMAKPNQFPAVLVACFGVCTLLYAGGAVMGYKMFGEDTLSQFTLNLPQDLVATKIAVWTTVVNPFTKYPLYACVHLD	435

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo4g03970	435	PANTHER	OS05G0424000 PROTEIN-RELATED	158	428	-	-
	Mepo4g03970	435	MobiDBLite	consensus disorder prediction	1	55	-	-
	Mepo4g03970	435	Pfam	Transmembrane amino acid transporter protein	152	431	IPR013057	-
	Mepo4g03970	435	MobiDBLite	consensus disorder prediction	30	55	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mepo4g03970	Mepo-Chr4	49190721	49193865	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo4g03970	3	428	Amino Acid or Auxin Permease AAAP Family	AT2G39130	72.018	0.0	624

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo4g03970	K15015		-	gmx:100775840	656.366

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo4g03970	4	49190721	49193865	Mepo4g03970	4	49190721	49193865	ECH