Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03964 ATGCCGTTAAATGTGACGCTGACACGCAATGGTGTTGAACTACCAAAGAAGCAAGGGAGCTGTAGAACAAAGAAATCTGGGACAAGTCTTACAGATTGTGACAGAACCGCTATCAAAGCACTATTCGATAAACTAACAAGTAATGATATTGAACAGCAAAAGGCGGCTGCTGGTGAGCTCCGCCTGCAGGCAAAGAGGAATGCAGAAAACCGAGTATGTATTGCCGAGGCAAAAGCAATACCGCTTCTCATAAAGCTGTTGTCCTCCATGGATCCTCGAACTCAGGAGCATGTTGTTACGGCACTTCTCAGTCTTTCAATCAACGAGAGTAACAAAGGAACTATAGTAAACGCGGGAGACAATTAA 366 0.4454 MPLNVTLTRNGVELPKKQGSCRTKKSGTSLTDCDRTAIKALFDKLTSNDIEQQKAAAGELRLQAKRNAENRVCIAEAKAIPLLIKLLSSMDPRTQEHVVTALLSLSINESNKGTIVNAGDN 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03964 121 Gene3D - 21 119 IPR011989 -
Mepo4g03964 121 Pfam Armadillo/beta-catenin-like repeat 67 106 IPR000225 GO:0005515
Mepo4g03964 121 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 78 120 IPR000225 GO:0005515
Mepo4g03964 121 PANTHER U BOX DOMAIN-CONTAINING 8 119 - -
Mepo4g03964 121 SUPERFAMILY ARM repeat 34 119 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03964 Mepo-Chr4 49100250 49101111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03964 10 119 U-box Gene Family AT3G54850 70.270 4.06e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03964 - - lja:Lj5g3v1796810.1 186.808