Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03947 ATGAGTGAAGAATGTGGTGGAAACACTATTGCTACATCTACTACTCCATTAAACTGGTGGTATCTTCAAGCAAATTCTCTTTCTTCTAATTGGAACGATGTTAAACATGCATGGAACAACCAAATGAATAATCCAAATTCTTCCTCTTCTTGTGAGGATCAAGATATATCTGTTTCTTCTACATCTTTCACCAATGCATCCAACCATTCAAGCCTCACCGTTGAATCCTCTCGAAGAGTCTTCGTCGAGCCGCATGCACCACCTTCCTTCAACGACTTCATGGCCGAACATGCTTCGGATAACCAACTATGGAGTCATGTTTTGTCAGGTGTTGGATCAAATGGAGAGTTGCACAACAACCAAGAAATTGGAGAGAATTTCTTGGATGGCCTATCATCAAAAACCATGACAAACACTATGTTTGATCAACCAGCTTGTGACTATTTGAAGAAACTTGATACAACAAGTTGGGAATATAATACTAGTGGTTCAACTTCATTCAATACTAATTTTGAGAAGCACTTAAATGGATACAGTGAAGCTCTTGTTGAGAATAATGAAAGGTTGACAAAATTATCCAATCTTGTGAGCACTTGGTCTATTGCCCCACCTGACCCTGAAGTTAGTAGCCACTTTGATTCACAAACAAACAACAATTTGTCTACTAATTCCTCCAATATGGATCATAATCACTACACACATGATTCTGACCCTAATTGTCATTTCAAACTACCTTTTGGTGATTCCACATCATGTACTATTAGAGAAGGAGTAGGTAATAAAATGTTCCCTAGTTGCCATGATATTCAAGACATGAATAAGGTTAAGCAAGAATATCATCATCATGCAAATGAAGTGATGCAAGGACATGTATTTAGAAAATCACTTAACCCAAATGGATATCTTGATGGATTTAATAATAACCTTAATTCAGTGGGAGATCACAATGGCAAATTTTATGAAGGGTTGCCAAATATTTCACCATGCACCAAAAATTTCTCAGATGTTATATCCTTTAATAGTAGGCTTGGAAGGCCAGTTGTTGGAATTCATCCACAAAGGCTTAATATGAGATACTCAAACTTATCTGAGTCAAAGAAACAAGGGCTTCAAACACCATCACATATGAGAACTACTAATGGAAGAGGAGAGGGAACAACACGTGAAGTAAAGAAGAAAAGATCTGAAGAATCATCAGAAGCAAGTTTGAAGAAGCCTAAGCAAGATACTTCAACAACAAATTCAGCTTCAAAGGTGCAAGCACCTAAAGTCAAGCTAGGAGACAAGATCACAGCCCTTCAACAAATTGTGTCTCCATTTGGAAAGACTGATACAGCATCTGTGCTGTTTGAAGCAATAGGGTACATAAAGTATCTTGAAGAACAAGTCCAGTTACTGAGCAACCCTTACTTGAAGGCAAATTCACACAAGGATCCAAGGGGAAGCTACTTCGATAGAAAAGATAAGGAGGATGCAAAGCTAGACCTTCGAAGTAAAGGTCTTTGTTTAGTTCCTACTTCATGTACCCCTATAGTTTATAGAGAGAACAATGGACCAGACTACTGGACACCAGCGTATAGAGGATGTATGTATAGGTGA 1599 0.3809 MSEECGGNTIATSTTPLNWWYLQANSLSSNWNDVKHAWNNQMNNPNSSSSCEDQDISVSSTSFTNASNHSSLTVESSRRVFVEPHAPPSFNDFMAEHASDNQLWSHVLSGVGSNGELHNNQEIGENFLDGLSSKTMTNTMFDQPACDYLKKLDTTSWEYNTSGSTSFNTNFEKHLNGYSEALVENNERLTKLSNLVSTWSIAPPDPEVSSHFDSQTNNNLSTNSSNMDHNHYTHDSDPNCHFKLPFGDSTSCTIREGVGNKMFPSCHDIQDMNKVKQEYHHHANEVMQGHVFRKSLNPNGYLDGFNNNLNSVGDHNGKFYEGLPNISPCTKNFSDVISFNSRLGRPVVGIHPQRLNMRYSNLSESKKQGLQTPSHMRTTNGRGEGTTREVKKKRSEESSEASLKKPKQDTSTTNSASKVQAPKVKLGDKITALQQIVSPFGKTDTASVLFEAIGYIKYLEEQVQLLSNPYLKANSHKDPRGSYFDRKDKEDAKLDLRSKGLCLVPTSCTPIVYRENNGPDYWTPAYRGCMYR 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03947 532 MobiDBLite consensus disorder prediction 405 420 - -
Mepo4g03947 532 MobiDBLite consensus disorder prediction 363 420 - -
Mepo4g03947 532 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 410 459 IPR011598 GO:0046983
Mepo4g03947 532 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 190 511 - -
Mepo4g03947 532 MobiDBLite consensus disorder prediction 382 404 - -
Mepo4g03947 532 CDD bHLH_AtbHLH_like 425 467 IPR045239 -
Mepo4g03947 532 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 425 474 IPR036638 GO:0046983
Mepo4g03947 532 MobiDBLite consensus disorder prediction 363 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03947 Mepo-Chr4 48967306 48971563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03947 28 532 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G31050 30.467 6.55e-39 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03947 - - tpra:123920059 944.88