Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03943 ATGATGCCCCCTGAGCAAGAAAAAACTATTAATGCACCAAATAACAATTCACCCAACACAAACAGAACAGAGAGCAGCTCCATCCATGGTGAACCAGATGGTTCTTCTTCTAACAAAGTTAAACCAAGTTTGGATATTGATCACAACGCCATTAATATTCCTTCTCATCCAACTACACCACTCACATCATTTTCTATTCTTCCTCAATCTTTGCGACCAGTTACACTCAAATTTGAAGATGTTTCATACAGCATAACCACGACAAACCAAAAGAAAAAAGGTTGCGTTATGGGAAAAGAATCAAAAGCAACAAGAAAAATCCTCAACGGAGTCACCGGAGTAGCAAGACCCGGCGAGTTAACAGCAATGCTAGGACCCTCAGGGAGCGGCAAAACTACCCTACTAACGGCCTTAGCCGGAAGACTTGCCGGAAAAGTCACCGGAACAATAACATACAACGGAAACTCAGACTCATCCTGCATGAAACGCAAAATAGGATTTGTTTCACAAGACGATGTAGTTTACCCTCACTTAACGGTGTTGGAAACATTAACCTACACCGCACTCTTGAGACTTCCGAAGACACTTACCCGCGAAGAAAAGGTCGAACACGCGGAGAGGATAATCACCGAGCTCGGCCTTACACGGTGCCGGAACACTCCGGTTGGCGGGTGTATGGGACTTTTTCGGGGAATCTCCGGTGGAGAAAGAAAAAGGATGAGTATTGGGCAAGAAATGTTGGTGAACCCGAGTTTGTTGTTTTTGGATGAACCGACTTCCGGTTTGGACTCAACCACGGCTCAACTTATTGTTTCGGTTCTTCGGGGTTTGGCTCGGTCGGGTCGAACCGTTGTTACTACTATTCATCAGCCTTCAAGCCGGTTGTATAGGATGTTTGATAAAGTGGTGGTTTTGTCTGATGGGTATCCAATTTACAGTGGTAATGCAGGTCGGGTTATGGATTATCTGGGATCCGTTGGGTTTGTTCCGGGGTTTAACTTTGTTAATCCTGCTGATTTTCTCCTTGATCTTGCTAATGGCATAGTTGCTGATGTTAAACATGATGAGATAGAGCAGCATGATCAAGATCAAGCTTCAGTGAAACAGTCATTAATTTCATCCTATAAGAAAAACTTATACCCTGCTCTTAAAGAAGATATTCAGCACATTAACACTGAACCAGTTGTTTTTGCATCAAGAGGAACATCTAGACGTTCTTCTGATAACCAGTGGTGCACAAGCTGGTGGGAGCAATTCAAGGTTCTGCTCAAGAGGGGTTTACAAGAGAGGAGGCATGAATCTTTTTCTGGCTTAAAGATTTTCCAAGTCTTGTCTGTTTCCATTCTCTCAGGACTCCTCTGGTGGCACTCTGATCCCTCACACATTCAAGATCAGGTAGGACTTTTATTCTTCTTCTCCATCTTTTGGGGATTTTTCCCTCTCTTCAATGCAATCTTTGCATTTCCACTGGATAGACCAATGCTAAAAAAAGAAAGATCATCAGGAATGTACCATCTATCATCCTACTATGTTGCTAGGATGGTAGGAGACTTACCAATGGAGCTTGTTCTTCCTACAATTTTTGTAACTATCACCTACTGGATGGGTGGTCTTAAGCCTTCCCTAGTTACATTTGTGTTAACCCTCTTGATCATGCTTTTCAATGTTATGGTCTCTCAAGGAATAGGCTTAGCACTTGGTGCAATTCTCATGGATGTTAAGCAGGCCACAACTCTAGCTTCAGTGACAATGTTGGTTTTTCTTTTAGCTGGTGGTTACTACATTCAGAAAATGCCTTCTTTTATAGCTTGGTTAAAGTACTTTTCTTTCAGTCATTACTGTTATAAGCTGCTTGTAGGGGTTCAGTATTCAGTAAATGAGGTTTATGAATGTAGAGAAGGGTTGCATTGTAGGGCGAGAGATTTTCCTGCTGTAAAATGTTTGGAGCTTGGTAATACGTGGGGAGATGTGGCTGCATTGACTATAATGTTTGTTGGATACAGAGTTGTGGCATATTTAGCTTTGAGGAGGGGCAACCTAAATGCCTAA 2049 0.4246 MMPPEQEKTINAPNNNSPNTNRTESSSIHGEPDGSSSNKVKPSLDIDHNAINIPSHPTTPLTSFSILPQSLRPVTLKFEDVSYSITTTNQKKKGCVMGKESKATRKILNGVTGVARPGELTAMLGPSGSGKTTLLTALAGRLAGKVTGTITYNGNSDSSCMKRKIGFVSQDDVVYPHLTVLETLTYTALLRLPKTLTREEKVEHAERIITELGLTRCRNTPVGGCMGLFRGISGGERKRMSIGQEMLVNPSLLFLDEPTSGLDSTTAQLIVSVLRGLARSGRTVVTTIHQPSSRLYRMFDKVVVLSDGYPIYSGNAGRVMDYLGSVGFVPGFNFVNPADFLLDLANGIVADVKHDEIEQHDQDQASVKQSLISSYKKNLYPALKEDIQHINTEPVVFASRGTSRRSSDNQWCTSWWEQFKVLLKRGLQERRHESFSGLKIFQVLSVSILSGLLWWHSDPSHIQDQVGLLFFFSIFWGFFPLFNAIFAFPLDRPMLKKERSSGMYHLSSYYVARMVGDLPMELVLPTIFVTITYWMGGLKPSLVTFVLTLLIMLFNVMVSQGIGLALGAILMDVKQATTLASVTMLVFLLAGGYYIQKMPSFIAWLKYFSFSHYCYKLLVGVQYSVNEVYECREGLHCRARDFPAVKCLELGNTWGDVAALTIMFVGYRVVAYLALRRGNLNA 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03943 682 FunFam ABC transporter G family member 22 95 326 - -
Mepo4g03943 682 ProSitePatterns ABC transporters family signature. 232 246 IPR017871 GO:0005524|GO:0016887
Mepo4g03943 682 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 25 672 - -
Mepo4g03943 682 MobiDBLite consensus disorder prediction 1 43 - -
Mepo4g03943 682 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 76 332 IPR003439 GO:0005524
Mepo4g03943 682 Pfam ABC-2 type transporter 417 623 IPR013525 GO:0016020|GO:0140359
Mepo4g03943 682 SMART AAA_5 117 310 IPR003593 GO:0016887
Mepo4g03943 682 MobiDBLite consensus disorder prediction 8 43 - -
Mepo4g03943 682 Pfam ABC transporter 109 260 IPR003439 GO:0005524
Mepo4g03943 682 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 326 IPR027417 -
Mepo4g03943 682 CDD ABCG_EPDR 73 314 - -
Mepo4g03943 682 Gene3D - 70 326 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03943 Mepo-Chr4 48890579 48895184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03943 101 308 Calmodulin-binding Proteins AT2G36910 30.275 6.74e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03943 K05681 - gmx:100783696 1082.01