Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03930 ATGGCTGCGTCTGGACCGTCCTGGTTGGTGGACAAAAGGAGAATTGCAACAAAAATAAAGTGTGCATCTGAAGCAACCGAAAAAGTTATATGGGAAAGCAATCCTACCAGAGCTTGCCCAAATTGTCAACATGTTATCGACAACAGTGATGTAACACAAGAGTGGCCTGGATTACCTAGAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTGAAGGAAATTTAGAACCCCATCCTTTCATCGATGAATTTATCACTACTCTTAAAATGGATGATGGTATTTGTTATACTCATCCTCAGCGTTTACCAGGTGTTTCACGAGATGGAATTGCTTCACACTTTTTCCATAGAGCAATCAAAGCCTATAATACTGGAAGCCGAAAGCGTCGAAAAATATGCGGTCAGGATTTTGGTGATGTCCGCTGGCACAAGACTGGAAGGACTAAACCTATCTTCTTGAACGGGCTTCAGAAAGGCTGTAAAAAGATTATGGTTCTTTATATGACTCCGGAGAGTGGAGGAAAAGCTGAGAAAACTAACTGGGTTATGCATCAATACCATCTTGGAACAGCAGAGGATGAAAAGGATGGAGAATATGTTATTTCTAAAGTATTTTACCAGCAGCAGCAAGCCAAATTGGTTGAAAAAGATGACCAAAATGTTCCTGAAACCTCGGAAGCAACTCTTATAAAAGTGGATCCAGTCACTCCCAATTCCGTGACGCCTGAACCTCCTCGCAATGAGAAGCAATGTTCAGATGTAGACCAAGAACAAGAATCTCATCATAGTCCTCAGATTCTACCAAATCTTTCTCGGTTAGAATGGCTACTTGAAAGTCAGGATGACTGTGAAGAGCTTGCAAAAATTGACTCGTCGACGATAGAAACTCAAACTAACGAAGGGGTCGATAACATTGACCTGTCGCAAAATTTATTGGATTCACAGCAACTTGCGGAAGGACTTTCCTTGTTCGCAGATTTCTTTCAGAGCCAGTCTCCGAAAAGGGATGGGGAAAACGGAGAGCAAATGGAACGACCTAGTCTTTCTGTATATGCTCATTTAGGAGCAGAGCAATTGAAGAAAGATATTGAAGAGTGTCAAAATCTTGAACTTAACACTACAAAGAAGAATGATATTGAAGAATGCCTTAATCTTGACGTTGACACTGAAAAAAAGAACGATATCGAAGAGTGCCAAAATCTCAACCTTGACACTGCAAATGTAGAGCTTGACTCACAACCTTCCGATATTCGATTAAGTCAACTGGAATTCAGCTCGCAGGATAGCTATATTGCGTGGGGTGGTTGCAAGACAATCAACTAA 1350 0.4104 MAASGPSWLVDKRRIATKIKCASEATEKVIWESNPTRACPNCQHVIDNSDVTQEWPGLPRGVKFDPSDQEIIWHLLAKVGEGNLEPHPFIDEFITTLKMDDGICYTHPQRLPGVSRDGIASHFFHRAIKAYNTGSRKRRKICGQDFGDVRWHKTGRTKPIFLNGLQKGCKKIMVLYMTPESGGKAEKTNWVMHQYHLGTAEDEKDGEYVISKVFYQQQQAKLVEKDDQNVPETSEATLIKVDPVTPNSVTPEPPRNEKQCSDVDQEQESHHSPQILPNLSRLEWLLESQDDCEELAKIDSSTIETQTNEGVDNIDLSQNLLDSQQLAEGLSLFADFFQSQSPKRDGENGEQMERPSLSVYAHLGAEQLKKDIEECQNLELNTTKKNDIEECLNLDVDTEKKNDIEECQNLNLDTANVELDSQPSDIRLSQLEFSSQDSYIAWGGCKTIN 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03930 449 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 7 376 IPR044799 GO:0003700
Mepo4g03930 449 FunFam NAC domain-containing protein 8 67 220 - -
Mepo4g03930 449 ProSiteProfiles NAC domain profile. 58 216 IPR003441 GO:0003677|GO:0006355
Mepo4g03930 449 SUPERFAMILY NAC domain 43 216 IPR036093 GO:0003677|GO:0006355
Mepo4g03930 449 MobiDBLite consensus disorder prediction 224 276 - -
Mepo4g03930 449 Gene3D NAC domain 67 221 IPR036093 GO:0003677|GO:0006355
Mepo4g03930 449 Pfam No apical meristem (NAM) protein 59 197 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03930 Mepo-Chr4 48703358 48708705 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03930 21 218 NAC Transcription Factor Family AT1G28470 53.431 4.14e-71 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g03930 NAM 7.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03930 - - mtr:11406966 834.713