Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03926 ATGGCTGGACCATCGTGGTTGGTGGACCAAAGTACACCTGCAACCGCTATAAGGTGTGCATCCCGAACGACCGCAAAAGTTACATCGGAAAGTAATCCTACCAGAGCTTGCCCTAATCGTCAACATGTTGCTGACAATACTCAGGTAACACAAGAGTGGCCTGGACTTCCTAAAGGTGTTAAATTTGATCCATCTGATCAAGAGATAATATGGCACTTGCTTGCAAAAGTTGGTGAAGGAAGTTCAAAACCTCACCCTTTCATCGATGCATTTATCATTACTCTTAAAATGGATGATGGCATTTGTTATACTCATCCTCAGGATTTACCAGGTGTTTCACAAGATGGAATTGTTTTACACTTTTTCCATAGAGCAGTGAAAGCTTATAGTACTGGAAGTCGAAAGCGGCGAAGAATATGTGGTAAAGAGTTTGCTTATGTCCGCTGGCACAAGACTGGAAAGACTAAACCTATCCTCTTGAGCGGAGTTCAGAAAGGCTGCAAAAAGATTATGGTTCTTTATATGTTTCCAGAGAATGGAGGAAAAGGTGAAAAAACTAACTGGGTTATGCATCAGTATCATCTTGGAACAGAAGAAGATGAAAGGGAAGGGAACTACATTATATCTAAAGTATTTTACCAGCAGCAGCAAGCCAAATTGGGAAGAAAAGATGATCAAGATGTTCCTGAAACCGCGGAAGTAACTATTGCCAATGTTGATCTTGTCACTCCCAATTTTGTGACCACCGAACCTCCTCTTATTTCTCCCAATTTTGTAGACCAAGAACAAGAAACTCACCATATTCCTATGATTCTACAAAATCTTCCTCGGTTAGAAGAATGGCTACTTAATAGTCAGGATGACTGTGAAGAGCTTCCAAAAGTTGACCCGTCAACGGGAGAAACTCAAGAGATGGATAACATTGACATGCCGCTGAATCTATTGGATTCACAGCAACTGCAACTTCCGGAAACATTGTCTTGGTTCGAAGATTTCTTTCAAAGCCAGTCTCCGAAAAGGCACGAGGAAAATGACGAACAAAAGAACCAGCCTAGTCTTTCGACATATGCTCATTTAGGACCAGAGCAGTTGAAGAAAGACACGGAAGAGTCCCAAAATCTTGACCACACTGGCAATGTAGAGCTTGACTCAGAACCTTCCGACATTCGATTAAGTCAACTGGTATTTTCCTATGCTCTCAATGATCTTCCATTACGAATTATTCAGCTCACAGGAGCTATATTGCCTAGGGTGGCAATGCCTTCTGCAACTGCATCTTTTGATAAATAG 1290 0.4163 MAGPSWLVDQSTPATAIRCASRTTAKVTSESNPTRACPNRQHVADNTQVTQEWPGLPKGVKFDPSDQEIIWHLLAKVGEGSSKPHPFIDAFIITLKMDDGICYTHPQDLPGVSQDGIVLHFFHRAVKAYSTGSRKRRRICGKEFAYVRWHKTGKTKPILLSGVQKGCKKIMVLYMFPENGGKGEKTNWVMHQYHLGTEEDEREGNYIISKVFYQQQQAKLGRKDDQDVPETAEVTIANVDLVTPNFVTTEPPLISPNFVDQEQETHHIPMILQNLPRLEEWLLNSQDDCEELPKVDPSTGETQEMDNIDMPLNLLDSQQLQLPETLSWFEDFFQSQSPKRHEENDEQKNQPSLSTYAHLGPEQLKKDTEESQNLDHTGNVELDSEPSDIRLSQLVFSYALNDLPLRIIQLTGAILPRVAMPSATASFDK 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03926 429 Pfam No apical meristem (NAM) protein 57 195 IPR003441 GO:0003677|GO:0006355
Mepo4g03926 429 SUPERFAMILY NAC domain 43 214 IPR036093 GO:0003677|GO:0006355
Mepo4g03926 429 ProSiteProfiles NAC domain profile. 56 214 IPR003441 GO:0003677|GO:0006355
Mepo4g03926 429 Gene3D NAC domain 65 219 IPR036093 GO:0003677|GO:0006355
Mepo4g03926 429 FunFam NAC domain-containing protein 8 65 218 - -
Mepo4g03926 429 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 5 369 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03926 Mepo-Chr4 48687050 48691927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03926 7 221 NAC Transcription Factor Family AT1G28470 51.131 8.60e-68 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g03926 NAM 6.3e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03926 - - mtr:11408501 594.349