Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03919 ATGCAAACTCATCATCAGTACTACTCATTCTCTTGTGAGAGTGCCTCTTGCAGCAGCAGCTTGGATGATGAAGATTCCATCTTCCTCTCTCTTGCTCCTCCTGGCCACCAAATACCTCCCATACTCGCACCCCCTCATCCTACTACAATCCCTCCCTTTCATCAAAAACCTATTTCTACTACTACCTCTCTCCACCATGACCATACTTGTGCTGTAAATGTAGCACTTAATGCCCTAATTAATCCAACTTTCACTTCCAAACCATCTCACACTCCCATTATTCCTCAATATTGGATCCCTTCTCCTGCTCAAATCCTTGTTGGTCCCACCCAATTTTCTTGCACTGTCTGTAACAAAACCTTCAACCGTTTCAACAACATGCAGATGCATATGTGGGGACATGGATCTCAATATAGGAAAGGACCGGAGTCTCTAAAAGGGCCAAAACCAGCATCATCTTCATCAATGTTGAAACTACCATGTTACTGTTGTGCTGAGGGTTGCAGAAACAACATAAACTATCCAAGGGCAAGACCACTGAAAGATTTCAGAACCCTTCAAACACACTACAAGAGAAAGCACGGAGGGAAATCATTCGAATGCAGAAAGTGTAGGAAGACATTTGCTGTAAGAGGAGATTGGAGGACACATGAGAAAAATTGTGGGAAGCTTTGGTTTTGTATCTGTGGTTCTGATTTCAAACACAAAAGATCACTAAAAGATCATGTTCGTGCTTTTGGTAATGGCCATGCTCCACACACATTGGAATCTTTGAGTTTTGATGGACATAAAGTAATTGAAACTTACATGGAAGAAGAAGAAAGTGGAAGTGAAGATGAAGACAATAACAGTGAAGTTGTTTTTAGTTTGAATTAA 876 0.4121 MQTHHQYYSFSCESASCSSSLDDEDSIFLSLAPPGHQIPPILAPPHPTTIPPFHQKPISTTTSLHHDHTCAVNVALNALINPTFTSKPSHTPIIPQYWIPSPAQILVGPTQFSCTVCNKTFNRFNNMQMHMWGHGSQYRKGPESLKGPKPASSSSMLKLPCYCCAEGCRNNINYPRARPLKDFRTLQTHYKRKHGGKSFECRKCRKTFAVRGDWRTHEKNCGKLWFCICGSDFKHKRSLKDHVRAFGNGHAPHTLESLSFDGHKVIETYMEEEESGSEDEDNNSEVVFSLN 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03919 291 ProSiteProfiles Post-SET domain profile. 157 173 IPR003616 -
Mepo4g03919 291 SUPERFAMILY beta-beta-alpha zinc fingers 96 133 IPR036236 -
Mepo4g03919 291 PANTHER ZINC FINGER PROTEIN WIP2 83 279 IPR043584 GO:0003700|GO:0010468
Mepo4g03919 291 Gene3D Classic Zinc Finger 111 134 - -
Mepo4g03919 291 SUPERFAMILY beta-beta-alpha zinc fingers 183 219 IPR036236 -
Mepo4g03919 291 ProSitePatterns Zinc finger C2H2 type domain signature. 114 134 IPR013087 -
Mepo4g03919 291 ProSiteProfiles Zinc finger C2H2 type domain profile. 112 139 IPR013087 -
Mepo4g03919 291 SMART c2h2final6 199 219 IPR013087 -
Mepo4g03919 291 SMART c2h2final6 162 194 IPR013087 -
Mepo4g03919 291 SMART c2h2final6 112 134 IPR013087 -
Mepo4g03919 291 MobiDBLite consensus disorder prediction 271 291 - -
Mepo4g03919 291 FunFam Zinc finger protein WIP2 168 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03919 Mepo-Chr4 48568485 48569687 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03919 23 255 C2H2 Transcription Factor Family AT1G13290 66.265 2.98e-110 320
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo4g03919 zf-C2H2_6 0.00068 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03919 - - mtr:25484895 580.867