Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03918 ATGCAGCGTTTCAAAATGGGTTTCTCTGATTATATCCGAGCATTAGAACAAGAACGTCGTAAGATTCAAGTCTTTCCTAAAGAACTTCCTCTTTCTTTAGAACTCGTTACACAAGCTATTGAAGCTTGTAGACAACAATTTTCTGGAACAACAACTGAGTATAATTTGAATGGACAATCTGAGTGTTCTGAACAGACAACATCAACAGATGGACCTTTTTTAGAAGAGTTTATTCCAATTAAGAAAAGGGCTTCTTCTTATTCTCAAGAAGTGTTTGATGATGTAGAAGATTATGATCAACATTTTCATCATAAGCAACAAAAAGTTTCTTTGGATAATAAGAAGAAATCTGATTGGCTTAGATCTGTTCAGTTATGGAATTCAGATCCTTCATCTGAAGAGGATGTTACTAAGAAAGCAGTGCCTGTGTTGGAATTGAAGAGAAATGGAAGTGGTGGTGGTGCTTTTCATCCATTCCATAAAGAAGATAGAGTTAACAACAAGACTAGTGAATTGTTGAGTAAAGGACAACCCTCTTCGACCGGTGTAGCTGCCGTGAGTTCTAATGCTGCTACTGTCACAAGTAACAATGTTGAAAACATTAAAAGAGATGAAAAAGAGGAAAAGAGAAAGCAGCGACGGTGCTGGTCGCAGGAGTTGCACAAGCGATTCTTGAAGGCGCTTCAGCAGCTTGGGGGTGCAGATTGTGCCACACCAAAGCAAATCAGAGAGGTAATGAATGTTGATGGCCTCACAAATGATGAAGTCAAAAGCCATTTACAGAAATACCGGTTGCATACTAGAAGACCAAGTTCAACAAACAACGAAAGTGCCAATTCACAAACAGCAGCACCTTTTGTCCTTGTAGGAAACATTTTTGTCCAGCAACAAGAGTATGGTGGGGTAGCTTCATCAACAACAACAGGGGAAATGACAAAAGTGGTAGCACCTTCTGGAATCTATGCACCAGTAGCCACACATCCTCAAGTTGCTACAATTAAGAAACCAGAGTTTAAGAATTTTGAGCATTCAATCTCAGAAGAAAGGGGTAATAACAGTGAAGGTGCTGTTCATTCAAATTCACCTACCTCTTCATCCTCTACACATACTACTACCCATACTTCCCCTGGTTATTGA 1137 0.394 MQRFKMGFSDYIRALEQERRKIQVFPKELPLSLELVTQAIEACRQQFSGTTTEYNLNGQSECSEQTTSTDGPFLEEFIPIKKRASSYSQEVFDDVEDYDQHFHHKQQKVSLDNKKKSDWLRSVQLWNSDPSSEEDVTKKAVPVLELKRNGSGGGAFHPFHKEDRVNNKTSELLSKGQPSSTGVAAVSSNAATVTSNNVENIKRDEKEEKRKQRRCWSQELHKRFLKALQQLGGADCATPKQIREVMNVDGLTNDEVKSHLQKYRLHTRRPSSTNNESANSQTAAPFVLVGNIFVQQQEYGGVASSTTTGEMTKVVAPSGIYAPVATHPQVATIKKPEFKNFEHSISEERGNNSEGAVHSNSPTSSSSTHTTTHTSPGY 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03918 378 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 268 IPR017930 -
Mepo4g03918 378 Pfam Myb-like DNA-binding domain 213 264 IPR001005 -
Mepo4g03918 378 MobiDBLite consensus disorder prediction 350 378 - -
Mepo4g03918 378 SUPERFAMILY Homeodomain-like 209 269 IPR009057 -
Mepo4g03918 378 Gene3D - 210 268 - -
Mepo4g03918 378 MobiDBLite consensus disorder prediction 347 378 - -
Mepo4g03918 378 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 8 349 IPR044787 GO:0003700|GO:0006355
Mepo4g03918 378 NCBIfam myb-like DNA-binding domain, SHAQKYF class 211 266 IPR006447 GO:0003677
Mepo4g03918 378 FunFam Myb family transcription factor 210 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03918 Mepo-Chr4 48547007 48549287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03918 10 326 G2-like Transcription Factor Family AT1G68670 47.904 2.64e-79 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g03918 Myb_DNA-binding 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03918 - - aprc:113872943 476.092
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03918 4 48547007 48549287 Mepo4g03918 4 48547007 48549287 ECH