Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03908 ATGGAAGTTTTGTCTCTCTCCGTTACTTTCACCAAATCTCAAACCTTTCCCTCTCTCAAACCAAAAAACACAACCCAAATTCACCAACTTCCAATAAAAACAAAACTACCCAACAAAAACAATCCCTCTTCTTCTTGTTCCATTTCATGTAATTCCTCTTTTACTAGAATTTCAGCAACAAGTAACCAAACATCAATTCCACAAACCGATATGCTGTTGTTCCCTAATGGAAATTCAAAGCATTGGGTTGTTAGAATGGATAAACCTGCTGTTGGTGTTGTTACCAAAGCTCAAATTGTTGACCATTATGCTCAAATTTTGACCAAAATCATGGGAAATGAAAAGGATGCACAAATGTGTATATATCATGTTTCATGGAAAACCAATTTTGGGTTTTGTTGTGAACTTGATGAGGATTGTGCACATGAGCTAGCTGGTGTGCCTGGTGTCTTGTCTGTTCAGCCAGATGACAATTTTGAGTCTGAAAATAAATATTATGAAGGTAGAAATTTGGAAAATAGTCTGAATATGCCAAATTCTTCTGACGCAAGTCAGGAAGCTTCTGTGAAAACAAAGAAACTTTTTGTTACAGGGCTATCATTTTATACATCTGAGAAAACCTTACGCGCCGCATTTGAAGGCTTTGGTGAGCTTGTTGAAGTTAAAGTTATTATAGATAAAATTTCAAAAAGGTCCAAGGGTTATGCATTTATTGAATACACCACAGAGGAGGCCGCAAGTGCAGCACTCAAAAAGATGAATGGCAAGATTATTAATGGCTGGATGATAGTGGTGGATGTTGCCAAGACTACCCCGCCAAGATACAACAAGGGTCGTGCCAGACCATCTGCTTGA 855 0.3801 MEVLSLSVTFTKSQTFPSLKPKNTTQIHQLPIKTKLPNKNNPSSSCSISCNSSFTRISATSNQTSIPQTDMLLFPNGNSKHWVVRMDKPAVGVVTKAQIVDHYAQILTKIMGNEKDAQMCIYHVSWKTNFGFCCELDEDCAHELAGVPGVLSVQPDDNFESENKYYEGRNLENSLNMPNSSDASQEASVKTKKLFVTGLSFYTSEKTLRAAFEGFGELVEVKVIIDKISKRSKGYAFIEYTTEEAASAALKKMNGKIINGWMIVVDVAKTTPPRYNKGRARPSA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03908 284 SMART rrm1_1 193 266 IPR000504 GO:0003723
Mepo4g03908 284 Gene3D - 161 284 IPR012677 -
Mepo4g03908 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 192 270 IPR000504 GO:0003723
Mepo4g03908 284 FunFam Organelle RRM domain-containing protein 1, chloroplastic 70 159 - -
Mepo4g03908 284 PANTHER MULTIPLE ORGANELLAR RNA EDITING FACTOR 2, CHLOROPLASTIC-RELATED-RELATED 11 261 IPR039206 GO:0016554
Mepo4g03908 284 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 74 160 IPR037045 -
Mepo4g03908 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 194 260 IPR000504 GO:0003723
Mepo4g03908 284 SUPERFAMILY RNA-binding domain, RBD 180 281 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03908 Mepo-Chr4 48464238 48467255 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03908 184 277 C2H2 Transcription Factor Family AT2G19380 31.915 1.01e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03908 - - mtr:11405373 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03908 4 48464238 48467255 Mepo4g03908 4 48464238 48467255 ECH