Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03882 ATGAGTGACCTATATGGGTTACCGGAGGATCTCCGGCGGTTGATAACATCATCGAGAAACACTACACATCTACCAGTAGAACCACCTTGTTTGTATGGTGGTGCTGCTAGTGCTACTTTTCCCCCACCAAATTATTCCTATGACCCTATGATAGTTGGTGATATTTTCTACCCTCGTAGTAGCTTCACTCACCACCACTATGACTATTCCTCCACTGTTAACCCTACAAATACCACTATAGCTGCTACTGCTGCTGCAGCTTCTAATTCAGATCATGCTACTGCTTCTACTGCATTCTGTGTAGGTTTAGAAACTTCTGATAAAGGATGGCTTGGTAACTTTGATTCTTGTAACAACAGATGGCCTAGACAAGAGACTCTTTCTCTTCTTGAAATCAGATCTCGTCTTGATTCTAAGTTCAGAGAGAATAATCAGAAAGCACCCTTGTGGAATGAAATTTCTAGGATAATGGCTGAGGAATTTGGGTACCAAAGAAGTGGAAAGAAATGCAAAGAAAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAGGAAGGTAAAGCTAGTAGACAAGATGGTAAACACTATAGATTTTTCAGACAGCTTGAAGCAATATGTGGAGAACCAAACACAAACTCTAATGCCTCAACTTTAGACAAAATTACCCCTAATGCTTCCTTTGTTGCTACTCAAACTCCAACATTCACAATAAACCAAGAAAATACTAATGGCAATGATCACAATTTGATCCATAATCACAAGTACTCACAAAGCCTAAGTTTCTCAAACTCGTCTGAATTTGAGACATCCTCATCTGAAAACAACGATGAGGATCTCTCAACTATAGCACACACGATGAAGTCGTCGAAGGAGAAAGGGCAAAGTGGTCATAGGAGGGCAAGGAAAAGTTGGAGAGGTAAAGTTGAGGAGATTGTAGATTCTCACATGAAAAATATTATTGAGACTCAAGATGCTTGGATGGAGAGAATGTTGAGTGTTGTTGAACAAAGAGAACAGGAGATGGCATCAAAGGAAGAAGAAAGGAAGAGAAAAGAGTCAATGAGGTTTGATCAAGAAATTCATGAACTTTGGGCTAAAGAAAAAGCATGGGTTGAAGCAAGAGATTCTGCATTGTTAGAAGTTGTAAGAAAACATATTGGGATACAACTTGAAGCACCAAATAAGAGTAAGAGCCAAGAAGCAAATGATACAACAAATTATGAATACCCTTTTGAAAGTGTGGATAATATTCATAGATGGACAGAAATGGAAATTTCAAACTTGATACAACTAAGGAGTGGTTTTGAACATCAAGTAAGAGAAAAAGGATACTTGGATGATGGTGTTTGGGATGAAATAGGTGAAAGGATGGTTTATATGGGATTTAATAGGAATGGAGCTGAGTGCAAGAAAATATGGGATGATATTAGTATGTCTCTAAGAAGGACAGTGGACTGTGGAGTCAAAAACACAAGGCCTTGGTGTTTGGGACTTAAGCTGACAGATGATGACGACCTTTGA 1524 0.3865 MSDLYGLPEDLRRLITSSRNTTHLPVEPPCLYGGAASATFPPPNYSYDPMIVGDIFYPRSSFTHHHYDYSSTVNPTNTTIAATAAAASNSDHATASTAFCVGLETSDKGWLGNFDSCNNRWPRQETLSLLEIRSRLDSKFRENNQKAPLWNEISRIMAEEFGYQRSGKKCKEKFENLYKYYKKTKEGKASRQDGKHYRFFRQLEAICGEPNTNSNASTLDKITPNASFVATQTPTFTINQENTNGNDHNLIHNHKYSQSLSFSNSSEFETSSSENNDEDLSTIAHTMKSSKEKGQSGHRRARKSWRGKVEEIVDSHMKNIIETQDAWMERMLSVVEQREQEMASKEEERKRKESMRFDQEIHELWAKEKAWVEARDSALLEVVRKHIGIQLEAPNKSKSQEANDTTNYEYPFESVDNIHRWTEMEISNLIQLRSGFEHQVREKGYLDDGVWDEIGERMVYMGFNRNGAECKKIWDDISMSLRRTVDCGVKNTRPWCLGLKLTDDDDL 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03882 507 Gene3D - 421 483 - -
Mepo4g03882 507 Gene3D - 121 183 - -
Mepo4g03882 507 SMART sant 417 480 IPR001005 -
Mepo4g03882 507 SMART sant 117 180 IPR001005 -
Mepo4g03882 507 ProSiteProfiles Myb-like domain profile. 119 178 IPR001005 -
Mepo4g03882 507 PANTHER FI21293P1 89 488 - -
Mepo4g03882 507 CDD GT1 119 185 - -
Mepo4g03882 507 ProSiteProfiles Myb-like domain profile. 420 478 IPR001005 -
Mepo4g03882 507 FunFam trihelix transcription factor PTL-like 121 183 - -
Mepo4g03882 507 MobiDBLite consensus disorder prediction 287 307 - -
Mepo4g03882 507 Pfam Myb/SANT-like DNA-binding domain 419 495 IPR044822 -
Mepo4g03882 507 Pfam Myb/SANT-like DNA-binding domain 119 206 IPR044822 -
Mepo4g03882 507 Coils Coil 328 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03882 Mepo-Chr4 48209107 48211801 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03882 5 483 Trihelix Transcription Factor Family AT5G03680 36.699 2.46e-87 278
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mepo4g03882 Myb_DNA-bind_4 4.3e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03882 - - gmx:100787750 583.563