Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03875 ATGGACTTGCCGAAACACCACCGTCCCACACCAACAACCTCTCTGAGAGACACATCTGACTCCTCCACTGGTAGCTGGGATGCCCTCGAATGGACCAAAATCGAGCCAATTTCACGTTTTGTCTCTCCCGCGAATCTTGATTTTTTGCTCGATGATGAACAAGTTGTGGCCGAAGGACACGGCGTTGTTCTTGTCAATACAGATGATGCAGGCGTGTTGATTGTAACAAACTTTCGTATAATATTTTTGAGTGAGGGAACTAGAAAAGTTATTGCCCTTGGAACAATACCACTAGCAACCATTGAGAAGTTTAACAAGACAGCTGTAAAAGCTCAGTCAAATACTCATCAATTAGACAAGACACCAACACAAAGACTGCTGCAGGTGATCGGGAAAGATATGAGAATCATAGTCTTTGGTTTTAGGCCTCGTACAAAACAGAGACGTGCAATATATGATGCACTAGTGAAGTGTACAAAGCCAACAATATTATGGGATCTTTATGCTTTTTCGTCTGGGCCTTCCACTTTTAAGAACACCTCTCCAATGGTGCGATTATTGGATGAGTATTTTCGACTCATTGGCAAAGCTTCTCGTCATGCTTCAATGGACATGATTGAAAGTGGCTCCTTCACCCTGTCAAATGACTTGTGGAGAATAAGTGGCGTGAATTCCAGTTATACAATGTGCCAGAGTTATCCATTTGCTTTGGTTGTTCCAAAGAGCATTAGTGATGATGAAGTGCTCCAGGCTTGCAAATTCCGTGCAAGATGCCGTCTGCCTGTAATTTCTTGGTGTCATCCTGTTACTGGCGCTGTTCTTGCACGTTCTTCCCAACCTTTAGTTGGTCTCATGATGAATATGAGGAGCAACATGGACGAAAAACTTGTGGCCGCACTTTGCGGCAACCTTGATGATGGCTCAAAGAGAAAGCTATATATCGCTGATGCAAGACCAAGGAAAAATGCATTAGCTAATGGAGCCATGGGAGGTGGTTCAGAATCATCATCAAACTATTTTCAATCTGAGATAGTCTTTTTTGGGATAGACAACATTCATGCAATGAGAGAGAGCTTTGTTCGTCTCCGAGAATTCATAGACACTCATGGCAGAACATCATCGGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCGATATGGGGTGGCGGCAATTTAAGCAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGTTATTGCATGTTCAGAATGTTTTAGCTGGTGCAGCTTGGATTGCTGCTCGTGTTGCTATGGAAAAGGCTTCTGTTCTTGTTCATTGCAGTGATGGATGGGATAGGACAAGTCAGTTAATTTCACTTGCTAATTTGTTGCTTGATCCATATTATCGGACATTCAGAGGGTTTCAGGCACTTGTCGAAAAAGACTGGCTAGCATTTGGTCATCCGTTTTCTGATCGTGTGGGAACACCGTCTATTTCTGGAAGTGGAAACATCTCTTTCGAGTTATCTAGGCAGTCTTCAACTGGCATCCCATCATCACCAATGCGCCAGGCATCAGGGACATTACCTCCAGCTCCATCTCATGCACAAAGTACAGGCAACTACTCTCCCATTTTTTTGCAGTGGGCTGATTGTGTGGCACAACTACTGCGGATGTATCCTTTTGCGTTTGAGTTTTCTGCGGCTTTCCTGGTGGACTTCTTAGACTGCATGCTTTCTTCTCGCTTTGGAAACTTCTTCTTTAATAGTGAAAAGGAGAGGCTGCAGTGCAATGTGTTTGAAAGTTGTGGATGTTTGTGGGCATACTTGGCTGATAGGCGGGCATCAGAAGGAGGTTTACATGTGCATTGTAATCCCTTTTATGATCCACTGAAGTACAGAGGTCCTCTTCTGCCCCCAGCAGCAGCGTTAGCCCCGAATATATGGCCCCAATTTCACCTTCGTTGGGCCTGCCCAGAAGAAGCACACAGTGGGGAGATTGAAGCACAATGTAGGAAGATAATACTGAAAAACTCGGAGATGCAGAAGGCTAAAGAAGTGGCAGAAAGGAAAGCTAGAGAAAATACAAATGCTATGCAATCATTGCAAGCTGAATTGCGACGAGAGAAACTGTTGAATATCTCAGCTATGAACACGGCAAAGAGGATAACCAAAGAAAATACGGACATAAAGCGTGCAATTCAGTCAATTGGGTGCAAGATTCACATTTCTAGTAGTGGTGATTGCATTGTTGACATTGAAAACAACCCAGCGGGAGCACATCCAAACTTGTATTGTTCCTCTAGGCAAGGATCAAGTAGTGCTGTGATTAATGACAAAAAGGATCTATATGTGTCTGTAACAGAAGATGACGGTGATGATGGAAACGATGTTATTGGTCGAATATGTGACTCTCTATGCCCGTTTCGTACCAAAGATGGAGGCTGCAGGTGGCCAAATGGTGGTTGTGCTCAACTAGGTAGCCAGTTTGTTGGTTTGAAAGCGAATTTTGATGCATTTGACCAACTTTCAATTGATGACAGTTATTTCAAGCCCAAGTAA 2532 0.4372 MDLPKHHRPTPTTSLRDTSDSSTGSWDALEWTKIEPISRFVSPANLDFLLDDEQVVAEGHGVVLVNTDDAGVLIVTNFRIIFLSEGTRKVIALGTIPLATIEKFNKTAVKAQSNTHQLDKTPTQRLLQVIGKDMRIIVFGFRPRTKQRRAIYDALVKCTKPTILWDLYAFSSGPSTFKNTSPMVRLLDEYFRLIGKASRHASMDMIESGSFTLSNDLWRISGVNSSYTMCQSYPFALVVPKSISDDEVLQACKFRARCRLPVISWCHPVTGAVLARSSQPLVGLMMNMRSNMDEKLVAALCGNLDDGSKRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRESFVRLREFIDTHGRTSSDGMSSFLRHGGSIWGGGNLSSMSASVSTLGDSGWLLHVQNVLAGAAWIAARVAMEKASVLVHCSDGWDRTSQLISLANLLLDPYYRTFRGFQALVEKDWLAFGHPFSDRVGTPSISGSGNISFELSRQSSTGIPSSPMRQASGTLPPAPSHAQSTGNYSPIFLQWADCVAQLLRMYPFAFEFSAAFLVDFLDCMLSSRFGNFFFNSEKERLQCNVFESCGCLWAYLADRRASEGGLHVHCNPFYDPLKYRGPLLPPAAALAPNIWPQFHLRWACPEEAHSGEIEAQCRKIILKNSEMQKAKEVAERKARENTNAMQSLQAELRREKLLNISAMNTAKRITKENTDIKRAIQSIGCKIHISSSGDCIVDIENNPAGAHPNLYCSSRQGSSSAVINDKKDLYVSVTEDDGDDGNDVIGRICDSLCPFRTKDGGCRWPNGGCAQLGSQFVGLKANFDAFDQLSIDDSYFKPK 843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03875 843 Gene3D - 60 159 IPR011993 -
Mepo4g03875 843 MobiDBLite consensus disorder prediction 503 526 - -
Mepo4g03875 843 ProSiteProfiles Myotubularin phosphatase domain. 195 643 IPR010569 -
Mepo4g03875 843 CDD PTP-MTM-like 258 545 - -
Mepo4g03875 843 ProSitePatterns Tyrosine specific protein phosphatases active site. 435 445 IPR016130 GO:0016311|GO:0016791
Mepo4g03875 843 SUPERFAMILY PH domain-like 49 171 - -
Mepo4g03875 843 MobiDBLite consensus disorder prediction 1 24 - -
Mepo4g03875 843 SMART gram2001c 38 108 IPR004182 -
Mepo4g03875 843 CDD PH-GRAM 71 155 - -
Mepo4g03875 843 PANTHER MYOTUBULARIN-RELATED 20 747 IPR030564 -
Mepo4g03875 843 Coils Coil 675 695 - -
Mepo4g03875 843 Pfam Myotubularin-like phosphatase domain 167 584 IPR010569 -
Mepo4g03875 843 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 212 647 IPR029021 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03875 14 843 Protein tyrosine phosphatase (PTP) family AT3G10550 66.865 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03875 K18081 - gmx:100781842 1356.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03875 4 48097624 48110066 Mepo4g03875 4 48097624 48110066 ECH