Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03853 ATGAACTGTCTTCAGAATCTTCCCAGATCCTCCCCTGTTTTACAATTCCACACTCTCGTTCCTCCTGCTCCTGCTCCTGCTCGCCACCACAATATCATTCTTCCTTCATCCTCTTCTTCTCTATCCCTGGGAATCATCACTAAATCTCATAACATTCCAACCATGCTACTTAAGGCTACTTCTGGTTCTATACCAAGTGCAGAGACAAGTAGCTCTGATGTTGAGGAGGAGGTCAAGTCTGAGATATACAGTAATAACATGACAGAGGCCATGGGTGCTGTTTTGACTTATAGGCATGAATTAGGAATGAACTACAACTTCATCCGTCCGGACTTGATTGTTGGATCATGCCTGCAGACTCCTGAAGATGTTGATAAACTGCGTAAAATCGGAGTGAAAACTATATTTTGCTTGCAACAAAACTCAGATCTAGAATATTTTGGAGTTGATATCAATGCCATACAAGAATATGCCAACACATGCAATGACATTCAACACTTGCGTGCTGAGATAAGGGACTTCGATTCATTTGATCTACGAAAGCGGCTTCCAGCTGTAATTAGCAAATTATATAAGGCAATTAATTCTAATGGAGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCTCCAGCTGTTGCGTTGGCATATATGTTTTGGGTTCAGGGTTATAAACTCAATGAAGCTAATACACTACTTCTGAGCAAAAGGTCATGCTTTCCAAAGCTGGATGCCATAAAAAGTGCAACAGCCGATATTCTTACAGGCCTCAGTAAGAAGCCTGTCACTTTGTCGTGGGGACACCGCAATTGCTCTACGGTGGAAATTTCAGGACTTGATATTGGATGGGGGCAGAGAGTGCCCTTAAATTTCGATGACAAACAGGGTTCATGGTTTCTCAAGAAGGAAATGTTTGAAGGGCGCTACGAGTACAAGTACATTGTTGATGGAGAATGGACTTGTAATAACGATGAGCTTGTAACCTCTCCCAATAAAGATGGCCATGTCAACAATTTTATCGAAGTCCTTGATGATGCGGACAGTGGTCGTGCCTCTCTTCGGGAGAGAGTGACTGGTGATGATCCTGATCTCACGAAGGATGAACGAAACAGAATAGTAGAGTTTCTGGAAGCTCTTCCCAATGAGGATCTCTGA 1161 0.4281 MNCLQNLPRSSPVLQFHTLVPPAPAPARHHNIILPSSSSSLSLGIITKSHNIPTMLLKATSGSIPSAETSSSDVEEEVKSEIYSNNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTPEDVDKLRKIGVKTIFCLQQNSDLEYFGVDINAIQEYANTCNDIQHLRAEIRDFDSFDLRKRLPAVISKLYKAINSNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLNEANTLLLSKRSCFPKLDAIKSATADILTGLSKKPVTLSWGHRNCSTVEISGLDIGWGQRVPLNFDDKQGSWFLKKEMFEGRYEYKYIVDGEWTCNNDELVTSPNKDGHVNNFIEVLDDADSGRASLRERVTGDDPDLTKDERNRIVEFLEALPNEDL 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03853 386 Gene3D Protein tyrosine phosphatase superfamily 97 377 IPR029021 -
Mepo4g03853 386 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 97 274 - -
Mepo4g03853 386 CDD E_set_AMPKbeta_like_N 263 344 - -
Mepo4g03853 386 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 101 246 IPR029021 -
Mepo4g03853 386 Pfam Glycogen recognition site of AMP-activated protein kinase 263 347 IPR032640 -
Mepo4g03853 386 CDD DSP_laforin-like 103 250 IPR045204 GO:0019203
Mepo4g03853 386 SMART dsp_5 104 254 IPR020422 GO:0006470|GO:0008138
Mepo4g03853 386 Pfam Dual specificity phosphatase, catalytic domain 146 242 IPR000340 GO:0008138|GO:0016311
Mepo4g03853 386 SUPERFAMILY E set domains 262 345 IPR014756 -
Mepo4g03853 386 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 181 239 IPR000387 GO:0016311|GO:0016791
Mepo4g03853 386 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 259 349 - -
Mepo4g03853 386 ProSiteProfiles Dual specificity protein phosphatase domain profile. 104 261 IPR020422 GO:0006470|GO:0008138
Mepo4g03853 386 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 35 383 - -
Mepo4g03853 386 Gene3D Immunoglobulins 259 349 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03853 Mepo-Chr4 47785746 47791700 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03853 103 380 Protein tyrosine phosphatase (PTP) family AT3G52180 68.705 1.20e-147 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03853 - - mtr:25484855 731.865