Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03850 ATGGCATTACAGCCTTTGTCTATCGTGATCTTACTGGCATATGGTGCACTGATAACTCTTGTATCATTGACACCATGCTGGTATGTCATGGTAACACATATTGAGAAACAAGTGAATTTGAGCTCAGAAAATATTGTAACCCAACTCCAATCAGAAATTAAGTACTCAGCTGAACTGTTGCATCCAATGAAATCATCATCAACAAATTTAGCAAGATTGTTGAGTTCAACACTTGATTCTACTAACATCTCTTTCTCTGATATTGAAACCAAGGTTGCTCCATTGTTATTTGAAGCATTTGAGACAGTTCCTCACTTAACTCAAATCTCATACATTGGAATGGAAGGTCTCTTTTTCTCATATTGCAGTGATCATGATCAAGCTCTAGCAATATACTCTAACTCATCATCAAATAAAATCTTATATTTTGTCAATCCTGTGAATAATGAAACTGGAAAGGTTTTTGGAGAAGCCATAATATCAAACTCTTCTATCAGCACAAGTTGGATTAAGAAAGCAGCTAATCTTTCGATCGAATTTGCTTCATTGGGAACCAAGTGGACCAATGGCCATGATCTTTTGTTTCTAAATTCGGCTAGAGTCAACAGAATAGGAGTGATCTCTCTAGGGTTTTCAGCAAAAGCAATAACTGATTCTGTTACTCGTGTCAACCGTTTAGGATCAAGCACGTATTTGGTTACAAAAGATGGACAAATTCTTGTGGAAGGGATTCAACATATTGGTTTGGTTATTTCTAATGATTCGGTTTCATTTCAATCAGTGAATGCAAATGGAGATGTGATAAAGAATTATGAGGGTACTGTCTCATGCAAGGATGAAGCTACTGCTTCTAGTTTGAATATTCAAAATACTCAATATCTAATCCGCTGCTCCCCGATTGATATATTGGGAATAGAATCGGTGTATGTTTTGGCTGTACCAAGAAATGGATTTGATGTGAGTTACAAGAAAATGGGATTGGCTCTATTGAATGTAATGTTGGTAATGATACTTGTTGCTGTCTTGGGGTTTCTATTTATAGACGGTAGAGCTATAAGGAGAGAAATGCACTTGTGTGCCTCACTGATCAAACAAAAGGAGGCCACTCACCAAGCTGAGAGAAAAAATATGAACAAGAGCCTCGCCGTTGCTAGCGCCAGCCATGACGTTCGCACTTCTCTCGCAGGCATTACTGCTCTCATAAAAATTTCATCTAAGTTAGTTCCACCTGGTTCAGAATTGGCTTCCAATTTAATCCAAATGGAGGACTGTACACAAGACTTACTTGGACTATTGAACTCTATACTTGACACAAGCAAAATTGAGGTAGGAAAAATGGAACTTGTGGAAGAAGAATTTGATTTATCTCATTTCTTGGAAGAAGTGGTTGATATATACCATCTTGTGGCAATGGAGAAAGGTGTAGATCTTGTATTGGACCCTTGTAATGGTTCTGTTATAAAATATTCGCGCGTGAAAGGCGACAGGGGAAGACTTAAACAAGTTTTGTGTAATTTACTGAACAATGCTGTCAAATTCACAAATGAAGGACACATAACGGTTCGAGCATGGGCTCGGAAGCCAACATTAAGTAACTCAATAATCAAGACTAACCAAAATAGTTTCATGAAACAATTGTCATGGTTATTTTCTAAGAAAAAAAATGAAGCAGATGAGGACATAGAAAAAACTATGAATTCAATTCAACAAGATCCTCAGCGTTCTATGGATTTCACATTTGAAGTGGATGATACAGGAAAAGGAATTCCCAAAGAGAATTACAAGTCTGTGTTTGAGAATTATGTTCAAGTCAAAGAAACTAATCCTGTCCAAGAAGGAACAGGCTTAGGACTTGGAATTGTGCAGTCTTTGGTACGTTTGATGCATGGAGATATTGAAATTGTGGACAAGAATATTGGTGAAAAAGGAACATGTTTTAGGTTCAATGTGCTCCTCAGTTTATGCGAAGGTGAAACAGTGACAGATTTTAGCACAAGGGAAGGTCTTGAGTATGGAACAAGTAACAGTACTCAAGCTCAAGGGAGAACCACTCATGCTACTAGTTCTAGTTCAAACATTTGTTCCATGAGTCCCATTTATCATATGTGCAACTCTAGTCCTAGGCTCGAGGCATCTAGTGTTGTTCTTTTCATTGGAAACGTGGAGCGTCGGAGAACTTGTAAAAGGTTTATGAAGAGCTTAGGGATTAAAGTTAAGGTTGTGAAGTGTCAAAAGGATCTGTTTGATACTCTAGAGGAGATCAAACAGAAGGGTCGCCGTTCCAATGGCCCAAGTTCTCCAGAATCCTCTTCCAATTTGAGTTCTTCTCATTCCACATCTCATAATTCATTTTCTAGAGCTAAAGGTGTTCCCTTAAGTTTTATGGATGGAACTGAGTATATGTCTCCAGTTTTCAAAAAGACAAATTTTGGAACTGTAGCATATTTCGTCCTGATTGTCATCGATGCAAATGCAGGATCATCATTTCCTGAACTCTTTGGAATTGTATCCAAATTCAAGAAAGGCCTTTCGAATTCTTGTAACGTTGTTTGGTTGGATAATCCACATATGCATCGTATCAATTCTAGAATAATTGATCAAAATGACATTGTCATATCGAAACCATTTCACGGTAGTCGTTTGTTCCAAGTCATAATGCTTCTTCCTGAGTATGACAATGGTAGTGTTTGGCAAAGCATTAAGAAACCTCACACTAGAAATTCTCCGGTTCATCAAGGAGAAATTCAAGAATGTGAAGACTCAAGCTGTTACAAACCTTTGCATTGCAAGAAATTTTTGGTTGTTGAGGATACTAAAATTTTACGTGTTATAGCGACAAATATATTGGTTTCGCTTGGAGCGACTGTCGAGCAATGTGAGAATGGCAAAGAAGCTGTAATCCTAGTTGTTGAAGGTCTAAAAAGGGATGATCCTAATCCTCCTTATGATTACATCTTAATGGATTGCCAGATGCCGGTGATGGATGGATTTGAGGCAACAAGGCGGATACGAGAGATGGAGAAGCTGTTTGGTGTTCGCATTCCTATCATTGCATTAAGTGCAGATATTGATAGATCGACCACAGTGACTGGAATGGACTTTTATATAGAGAAGCCACTTAGAAAAGAGCATTTACTTGAAGCCATCAGAATCTTAAACAGTAAAGAGTGA 3171 0.3791 MALQPLSIVILLAYGALITLVSLTPCWYVMVTHIEKQVNLSSENIVTQLQSEIKYSAELLHPMKSSSTNLARLLSSTLDSTNISFSDIETKVAPLLFEAFETVPHLTQISYIGMEGLFFSYCSDHDQALAIYSNSSSNKILYFVNPVNNETGKVFGEAIISNSSISTSWIKKAANLSIEFASLGTKWTNGHDLLFLNSARVNRIGVISLGFSAKAITDSVTRVNRLGSSTYLVTKDGQILVEGIQHIGLVISNDSVSFQSVNANGDVIKNYEGTVSCKDEATASSLNIQNTQYLIRCSPIDILGIESVYVLAVPRNGFDVSYKKMGLALLNVMLVMILVAVLGFLFIDGRAIRREMHLCASLIKQKEATHQAERKNMNKSLAVASASHDVRTSLAGITALIKISSKLVPPGSELASNLIQMEDCTQDLLGLLNSILDTSKIEVGKMELVEEEFDLSHFLEEVVDIYHLVAMEKGVDLVLDPCNGSVIKYSRVKGDRGRLKQVLCNLLNNAVKFTNEGHITVRAWARKPTLSNSIIKTNQNSFMKQLSWLFSKKKNEADEDIEKTMNSIQQDPQRSMDFTFEVDDTGKGIPKENYKSVFENYVQVKETNPVQEGTGLGLGIVQSLVRLMHGDIEIVDKNIGEKGTCFRFNVLLSLCEGETVTDFSTREGLEYGTSNSTQAQGRTTHATSSSSNICSMSPIYHMCNSSPRLEASSVVLFIGNVERRRTCKRFMKSLGIKVKVVKCQKDLFDTLEEIKQKGRRSNGPSSPESSSNLSSSHSTSHNSFSRAKGVPLSFMDGTEYMSPVFKKTNFGTVAYFVLIVIDANAGSSFPELFGIVSKFKKGLSNSCNVVWLDNPHMHRINSRIIDQNDIVISKPFHGSRLFQVIMLLPEYDNGSVWQSIKKPHTRNSPVHQGEIQECEDSSCYKPLHCKKFLVVEDTKILRVIATNILVSLGATVEQCENGKEAVILVVEGLKRDDPNPPYDYILMDCQMPVMDGFEATRRIREMEKLFGVRIPIIALSADIDRSTTVTGMDFYIEKPLRKEHLLEAIRILNSKE 1056
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03850 1056 ProSiteProfiles Histidine kinase domain profile. 385 654 IPR005467 -
Mepo4g03850 1056 SMART REC_2 930 1049 IPR001789 GO:0000160
Mepo4g03850 1056 SUPERFAMILY CheY-like 927 1050 IPR011006 -
Mepo4g03850 1056 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 494 652 IPR003594 -
Mepo4g03850 1056 Gene3D - 443 656 IPR036890 -
Mepo4g03850 1056 SMART HisKA_10 378 444 IPR003661 GO:0000155|GO:0007165
Mepo4g03850 1056 SMART HKATPase_4 494 654 IPR003594 -
Mepo4g03850 1056 MobiDBLite consensus disorder prediction 669 690 - -
Mepo4g03850 1056 CDD HisKA 376 440 IPR003661 GO:0000155|GO:0007165
Mepo4g03850 1056 Pfam Response regulator receiver domain 933 1050 IPR001789 GO:0000160
Mepo4g03850 1056 PRINTS Bacterial sensor protein C-terminal signature 596 606 IPR004358 GO:0016310|GO:0016772
Mepo4g03850 1056 PRINTS Bacterial sensor protein C-terminal signature 578 592 IPR004358 GO:0016310|GO:0016772
Mepo4g03850 1056 PRINTS Bacterial sensor protein C-terminal signature 612 630 IPR004358 GO:0016310|GO:0016772
Mepo4g03850 1056 ProSiteProfiles Response regulatory domain profile. 931 1053 IPR001789 GO:0000160
Mepo4g03850 1056 MobiDBLite consensus disorder prediction 760 785 - -
Mepo4g03850 1056 MobiDBLite consensus disorder prediction 754 785 - -
Mepo4g03850 1056 Gene3D - 349 442 - -
Mepo4g03850 1056 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 366 446 IPR036097 GO:0000155|GO:0007165
Mepo4g03850 1056 CDD REC_hyHK_CKI1_RcsC-like 932 1049 - -
Mepo4g03850 1056 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 433 649 IPR036890 -
Mepo4g03850 1056 Gene3D - 910 1054 - -
Mepo4g03850 1056 PANTHER TWO-COMPONENT HISTIDINE KINASE 73 1050 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03850 Mepo-Chr4 47758497 47762958 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03850 1 1055 Histidine Kinase Gene Family AT2G47430 38.937 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mepo4g03850 HATPase_c 2.5e-25 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03850 - - cam:101504256 1584.7