Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03827 ATGTCTGGAGAGGAAATTTGGTCATCCGTTGAAGAAGAATCTGGTGAATCTCTGTCTCCATTTGATAACAGGAGTGGCTACAATCCAAGAACAGGAGTTTACCATTCTCTTGTTAAGCTTGAAACCAAACATGAAATCCCAACAAAGCCAGATCTCAACACTGCAACTCTTGTGCTATCACAGTTCCCACAAGGAGATCTTGCTGATGCAAGAATTGCATTTGTTGATTTAAGTACTAATCACAGTGTAACCTACGGTGAGATTCGTCGATCAGTTTACTCCCTTGCGACAGCTTTGTTCCATGGACTTGAGATTAGAAAAGGCGACGTCGTGTTTTTATTGTCTCCAAACTCAATCTTGTACTCAACTATATGTTTAGCTGTGTTATCAGTTGGTGCAATTCTTACCACAGCCAACCCTCTCAATACTAAGTCGGAAATCGCGAAGCAAGTACATGATTCAGGTGCTAAACTAGCCATCTCAGCACCAGAAGAGTTACATAAATTGGTTCCAAGTGGTGTTCCTACAATTCTCACCTCAAGTTCATTGGACGGAATTTTTTTATCAGTTGAAGAGTTAATAGAAGGCTGCTATGATTCACAAGAGTTGCCACACATTCCTGTGGAGCAATCAGACACTGCCGCTATACTTTACTCTTCAGGGACTACAGGAGTAAGCAAAGGTGTTGTTTTGACACATGCAAATCTCATAACCATAATGAAACTGCTCTGCTGGTCTGCTGATGTATCTACAGCACAAGACGATGTTTTCCTCGCCTTCATTCCAATGTTTCATGTCTATGGACTGATGTTCTTTGGATTTGGATTGTTGTGTGTTGGTGTTACAACAGTTTTGATGCAAAAATATGATTTTCAAGCCATGCTTGTCGCTATCGAGAAGCACAAAGTTAATAACATACCAGCAGTGCCACCAGTGATCCACTCATTGGTGAAACATGCTAGCAAAGATGGTTGTGATTTGTCTAGTCTAAGAAGGGTTGGCTCAGGTGCTGCACCTTTGAGTAAGGAAATGTCACTGGAGTTCAGAAAGCTATTTCCTTGGGTTGAACTAAGGGCGGGTTATGGACTAACAGAAAGTTGTGGAGGAGCTACATTTTTCGGATCGGATAAAGATGCTAAAGCTCATCCAGAAGCATGTGGAAAGCTGATTCCAACTTTTTGTGCAAAAGTGATCGACATTGAAACAGGGAAGCCTTTGCCTCCACTCAAGGAAGGAGAGATATGGTTGAAAAGCGGTGCTATTATGAAAGAATATCTAGGAAATATTGAGGCAACAACTGCAACAATTGATTCAGAAGGTTGGTTGAGGACAGGTGATCTTGGTTATATTGATGAGAATGGAATTGTCTACATAGTTGAACGAATAAAGGAGCTAATCAAGCACAAAGGGTATCAGGTGGCTCCTGCCGAACTGGAATCTGTACTGCTAAGTCATCCCCTTATTGTCGATGCAGCAGTTATTCCGGTTGAAGATGAAGAAACTGGGCAGATACCAATGGCATATGTGGTGAGGGCAGCTGGTTCTCAACTCTCAGAAGACCAAGTCATTCAATTTGTTGCAGGCCAGGTGGCTCCCTATAAGAAAGTGAGAAGGGTGAGTTTTATTGACAGTATACCAAGGTCAGCTGCTGGCAAGATATTGCGCAAAGATCTTGTTTTGCAAAGCAAGTATCAGCTTGTCTCTAAGTTATGA 1713 0.4197 MSGEEIWSSVEEESGESLSPFDNRSGYNPRTGVYHSLVKLETKHEIPTKPDLNTATLVLSQFPQGDLADARIAFVDLSTNHSVTYGEIRRSVYSLATALFHGLEIRKGDVVFLLSPNSILYSTICLAVLSVGAILTTANPLNTKSEIAKQVHDSGAKLAISAPEELHKLVPSGVPTILTSSSLDGIFLSVEELIEGCYDSQELPHIPVEQSDTAAILYSSGTTGVSKGVVLTHANLITIMKLLCWSADVSTAQDDVFLAFIPMFHVYGLMFFGFGLLCVGVTTVLMQKYDFQAMLVAIEKHKVNNIPAVPPVIHSLVKHASKDGCDLSSLRRVGSGAAPLSKEMSLEFRKLFPWVELRAGYGLTESCGGATFFGSDKDAKAHPEACGKLIPTFCAKVIDIETGKPLPPLKEGEIWLKSGAIMKEYLGNIEATTATIDSEGWLRTGDLGYIDENGIVYIVERIKELIKHKGYQVAPAELESVLLSHPLIVDAAVIPVEDEETGQIPMAYVVRAAGSQLSEDQVIQFVAGQVAPYKKVRRVSFIDSIPRSAAGKILRKDLVLQSKYQLVSKL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03827 570 CDD 4CL 46 558 - -
Mepo4g03827 570 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Mepo4g03827 570 Pfam AMP-binding enzyme C-terminal domain 477 552 IPR025110 -
Mepo4g03827 570 Gene3D - 464 565 IPR045851 -
Mepo4g03827 570 FunFam 4-coumarate--CoA ligase 2 464 564 - -
Mepo4g03827 570 SUPERFAMILY Acetyl-CoA synthetase-like 69 559 - -
Mepo4g03827 570 Pfam AMP-binding enzyme 71 467 IPR000873 -
Mepo4g03827 570 Gene3D - 41 463 IPR042099 -
Mepo4g03827 570 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 31 559 - -
Mepo4g03827 570 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03827 Mepo-Chr4 47599237 47601838 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03827 28 559 Monolignol Biosynthesis Gene Families AT1G20500 43.015 4.96e-147 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03827 K10526 - gmx:100783104 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g03827 4 47599237 47601838 Mepo4g03827 4 47599237 47601838 ECH