Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03823 ATGGGTCACGAAGAACCTCTTTTACTTCCTCCACCCCCATCTACCACCACAATCAACCCTTCACCACTCACAGTTTCAGTACCATCGCCTTCTGCTTCTGCTTCTGCGGCCCCACCAACTTCCCTTGCTCCTGGCTTTAGGTTTCACCCTACTGATGAAGAACTTGTCATTTATTACCTGAAACGCAAGGTTTCTGGAAAACCCTTCAGATTTGATGCTATTGCTGAAGTTGATATCTACAAGAGTGAACCCTGGGATCTTTTTGATAAGTCAAGGCTGAAGACCAGAGACCAGGAGTGGTATTTTTTCAGTGCATTGGACAAGAAGTATGGAAATGGGGGAAGGATGAACAGAGCTACTCTTCAAGGGTACTGGAAAGCTACTGGAAATGATCGTCCAGTGAAGCATGACCTAAGGACCGTGGGGTTGAAGAAGACTCTGGTGTTTCATAGCGGCCGTGCTCCTGATGGTAAGAGAACAAATTGGGTCATGCATGAGTACAGGCTTGTCGAGGAAGAATTGGAGAGGGAGAGGGCTGGGGCTGGACCCTCTCAGCCACAGGAGGCATTTGTGCTGTGTAGAGTGTTTCACAAGAATAACATTGGGCCTCCAAATGGACAACGGTATGCACCTTTTGTTGAAGAAGAGTGGGAAGAAGGATCGGGAATGGTTCCTGGCGCTGAGCCTGTGACTGTGAGTAATGGTCCTGTTGACCGCCATCTGCGTCTTGAATGGAACGGTGGAGTTTCATGCAGTGAAGGAAGAAATCCTGTTGTGCAGGACACTCAATCCAACAACAAAACTCCACTTGATGTGAACAAGCTGCCAATTGAAACTCAAAATCTTCTTGCTGTGTGCAAGAGGGAGAGCATGACTGAGTTTTCATCACCTGAAAAGGATGATTCTAAGCATATCCATGTTGATGATGAGTACCCGTTACCCCCAACCGATAACCCAAAGCCAATACCTCAAATTTACAAAAGGCGGCGCTATAACTTGAACTCCAATCATTCAAATGTATCTGGAGATTCATTCCACCCTAACAGTCAGGATCCATGCTCGTCCACAATAACCACTGCAGCGACAACTCTCCCGACAACTGCTGCTGCTGTCACAACTGCCAAACCTGCACCGAAGAAACATTTTCTGTCTGCACTGGTGGAGTTTTCTCTGCTAGAATCACTTGAATCGAAGAAGGAAAACCACACCTCAGTTCAGCCGGCAGATTTTGACTTGGCGAATCTTGAATTGTGTGTGCCTCCGAGTGTTGCAAAGTACATCAAATACTTGCAGAGTGAGACACAGAAGCTTGGTGTTGAGAAGGAGACAATGCGGTTCGAGTTGACAAGTGCTCAAACCATGATTAACATTCTCCAGTCCCGTGTTGAAAATCTCAGCAAAGAGAACGAGGAGATGAAGATGATGATGAGAAATCCTTAG 1440 0.466 MGHEEPLLLPPPPSTTTINPSPLTVSVPSPSASASAAPPTSLAPGFRFHPTDEELVIYYLKRKVSGKPFRFDAIAEVDIYKSEPWDLFDKSRLKTRDQEWYFFSALDKKYGNGGRMNRATLQGYWKATGNDRPVKHDLRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVEEELERERAGAGPSQPQEAFVLCRVFHKNNIGPPNGQRYAPFVEEEWEEGSGMVPGAEPVTVSNGPVDRHLRLEWNGGVSCSEGRNPVVQDTQSNNKTPLDVNKLPIETQNLLAVCKRESMTEFSSPEKDDSKHIHVDDEYPLPPTDNPKPIPQIYKRRRYNLNSNHSNVSGDSFHPNSQDPCSSTITTAATTLPTTAAAVTTAKPAPKKHFLSALVEFSLLESLESKKENHTSVQPADFDLANLELCVPPSVAKYIKYLQSETQKLGVEKETMRFELTSAQTMINILQSRVENLSKENEEMKMMMRNP 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03823 479 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 41 336 - -
Mepo4g03823 479 MobiDBLite consensus disorder prediction 292 313 - -
Mepo4g03823 479 Gene3D NAC domain 51 201 IPR036093 GO:0003677|GO:0006355
Mepo4g03823 479 MobiDBLite consensus disorder prediction 19 38 - -
Mepo4g03823 479 MobiDBLite consensus disorder prediction 292 323 - -
Mepo4g03823 479 Coils Coil 448 475 - -
Mepo4g03823 479 Pfam No apical meristem (NAM) protein 44 169 IPR003441 GO:0003677|GO:0006355
Mepo4g03823 479 FunFam Nac domain-containing protein 86 51 201 - -
Mepo4g03823 479 MobiDBLite consensus disorder prediction 1 18 - -
Mepo4g03823 479 MobiDBLite consensus disorder prediction 1 44 - -
Mepo4g03823 479 ProSiteProfiles NAC domain profile. 42 198 IPR003441 GO:0003677|GO:0006355
Mepo4g03823 479 SUPERFAMILY NAC domain 35 199 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03823 Mepo-Chr4 47562623 47568471 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03823 1 473 NAC Transcription Factor Family AT3G10480 42.500 2.31e-111 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo4g03823 NAM 1.1e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03823 - - tpra:123908634 672.544