Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo4g03804 ATGTTTTCTAGGTTGATACGTCCTCATGACCATGAAGGAAGTGTTGTTGTTGTTCAGGAAGATACAAATCATCATCTTCATACTCACCTTGCTGCTGCTGACCCTTGTCTTGTTCTCACTTCTGATCCAAAACCTCGTCTTCGCTGGACTACTGACCTTCACCAACGCTTTGTTGATGCTGTCACTCAACTTGGTGGTCCTACCAAAGCCACACCGAAAGCGATCATGAGGACCATGAATGTCAAGGGTTTGACGCTCTATCATTTAAAGAGTCATCTTCAGAAGTATAGGCTCGGTAAGCAAGCTGGAAAGGATTTTGACGAGGGATGCAAAGATGGGTCATATCTTCTAGAAAGCCCTGGTACTGAAAACTCATCTCCAAAGTTACCAGCTTCTGATGCAAACGAGGGCCATGAAGTCAAGGAGGCATTAAGAGCACAAATGGAAGTGCAAAGTAAGCTACATTTACTAGTGGAGGCAGAGAAGCACTTGCAAATTCGCCAAGATGCAGAACGGAGATATATGGCCATGCTTGAAAGAGCATGTAAGATGTTGGCTGATCAATTTATCGGTGATACAACTATAGACACAGACATCCAAAAATTTCAAGAACTACCAAGTAGTGAGCTAGGTGGAAATGGAATGCATCTTTCAGAAGTGCCATATATTCTCCAGCCTCAAGGGGCTAACTGCTCCACAGAAAGTTGCCTAACATCACTTGAGAGTCTCAGAGGGCTGACACTAGAAGGATCACCTAGTGGGACAAAAAGGATGCTGGGCTTGGACTCCATGGTATCGCCTTTGATCTGGAGTGAAACTAACATGAGAACTCAAGGCATTCACTTAGCCCAAGTCAATCCTCAAGGAATAGCAAGGTATGGAATCTAG 888 0.4437 MFSRLIRPHDHEGSVVVVQEDTNHHLHTHLAAADPCLVLTSDPKPRLRWTTDLHQRFVDAVTQLGGPTKATPKAIMRTMNVKGLTLYHLKSHLQKYRLGKQAGKDFDEGCKDGSYLLESPGTENSSPKLPASDANEGHEVKEALRAQMEVQSKLHLLVEAEKHLQIRQDAERRYMAMLERACKMLADQFIGDTTIDTDIQKFQELPSSELGGNGMHLSEVPYILQPQGANCSTESCLTSLESLRGLTLEGSPSGTKRMLGLDSMVSPLIWSETNMRTQGIHLAQVNPQGIARYGI 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo4g03804 295 SUPERFAMILY Homeodomain-like 44 99 IPR009057 -
Mepo4g03804 295 FunFam Myb family transcription factor 43 101 - -
Mepo4g03804 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 44 99 IPR006447 GO:0003677
Mepo4g03804 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 17 226 IPR044848 GO:0003700
Mepo4g03804 295 MobiDBLite consensus disorder prediction 114 137 - -
Mepo4g03804 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 41 101 IPR017930 -
Mepo4g03804 295 Pfam Myb-like DNA-binding domain 47 97 IPR001005 -
Mepo4g03804 295 Gene3D - 43 101 - -
Mepo4g03804 295 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo4g03804 Mepo-Chr4 47375461 47379236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo4g03804 33 240 G2-like Transcription Factor Family AT3G24120 48.511 2.01e-63 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mepo4g03804 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo4g03804 - - gmx:100779871 436.032